Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RNU6-1180P-201ENST00000364935 107 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 RNU6-26P-201ENST00000383985 107 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 RNU6-622P-201ENST00000384272 103 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 Y_RNA.551-201ENST00000384661 102 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.27□□□□□ -1.89
USP25Q9UHP3 AC092423.1-201ENST00000430165 186 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.27□□□□□ -1.89
USP25Q9UHP3 SNORA59A-201ENST00000459326 152 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 AC112771.1-201ENST00000463581 102 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 AC103975.1-201ENST00000482506 483 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 SCARNA3-201ENST00000517097 143 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 CKS1BP7-201ENST00000522230 235 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 AC104581.2-201ENST00000572227 430 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 AC060766.3-201ENST00000591442 263 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 AC100812.1-201ENST00000607622 580 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 AC024581.2-201ENST00000619986 252 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 AC243829.7-201ENST00000633081 225 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 Z75746.1-201ENST00000440243 2080 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 AC080128.1-201ENST00000474389 1917 ntBASIC3.27□□□□□ -1.89
USP25Q9UHP3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 MIR512-1-201ENST00000384913 84 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 SNORA69.1-201ENST00000390904 137 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 RPL21P1-201ENST00000399532 476 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 FO393413.1-201ENST00000402892 195 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 Y_RNA.592-201ENST00000410274 109 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 RNA5SP494-201ENST00000410653 129 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 MTCO3P19-201ENST00000415864 321 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 FCF1P4-201ENST00000448326 183 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 MTCO3P8-201ENST00000453691 755 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.26□□□□□ -1.89
USP25Q9UHP3 Y_RNA.668-201ENST00000516233 93 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 AC110588.1-201ENST00000559699 137 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.26□□□□□ -1.89
USP25Q9UHP3 MYL12BP1-201ENST00000569826 507 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 AC090897.2-201ENST00000581715 130 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 MIR3199-1-201ENST00000582434 88 ntBASIC3.26□□□□□ -1.89
USP25Q9UHP3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP25Q9UHP3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
USP25Q9UHP3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP25Q9UHP3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.25□□□□□ -1.89
USP25Q9UHP3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP25Q9UHP3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
USP25Q9UHP3 ZNF72P-201ENST00000425869 1908 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 RNU6-874P-201ENST00000362390 105 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 Y_RNA.123-201ENST00000363338 102 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 Y_RNA.210-201ENST00000364161 110 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 RNU4-50P-201ENST00000364361 141 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP25Q9UHP3 RNU1-109P-201ENST00000383960 147 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 MIR592-201ENST00000384959 97 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 BTF3L4P2-201ENST00000392798 346 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 AL513124.1-201ENST00000450410 614 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.25□□□□□ -1.89
USP25Q9UHP3 AC097462.2-201ENST00000504623 481 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.25□□□□□ -1.89
USP25Q9UHP3 SNORA9.3-201ENST00000516383 129 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 AC109329.1-201ENST00000518744 317 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.25□□□□□ -1.89
USP25Q9UHP3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.25□□□□□ -1.89
USP25Q9UHP3 MIR3117-201ENST00000584034 78 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 AL359198.2-201ENST00000611836 194 ntBASIC3.25□□□□□ -1.89
USP25Q9UHP3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.25□□□□□ -1.89
USP25Q9UHP3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
USP25Q9UHP3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.24□□□□□ -1.89
USP25Q9UHP3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP25Q9UHP3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.24□□□□□ -1.89
USP25Q9UHP3 OR56A5-201ENST00000340110 738 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 RNU6-238P-201ENST00000363313 106 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 MIR218-1-201ENST00000384999 110 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 SNORA12.2-201ENST00000391040 156 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 U6atac.2-201ENST00000408644 118 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 AC092427.1-202ENST00000430569 476 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 AC108059.2-201ENST00000434626 151 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.24□□□□□ -1.89
USP25Q9UHP3 AC007969.2-201ENST00000441891 191 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.24□□□□□ -1.89
USP25Q9UHP3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.24□□□□□ -1.89
USP25Q9UHP3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.24□□□□□ -1.89
USP25Q9UHP3 RNU7-169P-201ENST00000459456 61 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.24□□□□□ -1.89
USP25Q9UHP3 AC023141.11-201ENST00000508864 202 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.24□□□□□ -1.89
USP25Q9UHP3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.24□□□□□ -1.89
USP25Q9UHP3 AL356157.2-201ENST00000605122 111 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 MIR8057-201ENST00000620957 69 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 AC097372.5-201ENST00000623665 376 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 AC241585.2-209ENST00000638217 143 ntBASIC3.24□□□□□ -1.89
USP25Q9UHP3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP25Q9UHP3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP25Q9UHP3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.23□□□□□ -1.89
USP25Q9UHP3 AC000403.1-201ENST00000613696 3585 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 MIR628-201ENST00000385229 95 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 SNORA48.2-201ENST00000390926 124 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP25Q9UHP3 MIR190B-201ENST00000401119 79 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.23□□□□□ -1.89
USP25Q9UHP3 RPL30P4-201ENST00000429309 333 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 MTCO3P29-201ENST00000432119 779 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms