Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 Y_RNA.191-201ENST00000363972 113 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 RNU6-418P-201ENST00000384035 107 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 RNU6-607P-201ENST00000411283 108 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AC078809.1-201ENST00000427601 140 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AC000111.3-201ENST00000433478 193 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AC073614.1-201ENST00000438690 650 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AC245047.7-201ENST00000440265 293 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AL358794.1-201ENST00000445689 381 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 COX6CP6-201ENST00000490840 228 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AC091435.1-201ENST00000505442 584 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AC090517.1-201ENST00000569307 266 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 MIR5695-201ENST00000579717 85 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 MIR4714-201ENST00000580728 77 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 MIR4452-201ENST00000583004 71 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AC008521.1-201ENST00000587471 187 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AC078795.3-201ENST00000602913 472 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AL929325.1-201ENST00000603096 117 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 BX322639.1-202ENST00000423987 2213 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AC068700.1-201ENST00000565862 3754 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 AC092268.1-201ENST00000342691 405 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 Y_RNA.4-201ENST00000362333 112 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 U3.4-201ENST00000363352 213 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 RNU6-378P-201ENST00000384324 107 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 RNU6-39P-201ENST00000384344 107 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 RNU6-950P-201ENST00000384651 107 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 AC112206.4-201ENST00000515142 405 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 RNU2-34P-201ENST00000516534 121 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 RNU6-922P-201ENST00000516753 99 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 TMF1P1-201ENST00000576058 373 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 AC016727.2-201ENST00000603988 621 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 AC064872.1-201ENST00000604823 1072 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 AL158042.1-201ENST00000605338 460 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 AC009509.4-201ENST00000619202 509 ntBASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.48□□□□□ -2.33
VPS29Q9UBQ0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 RNU6-336P-201ENST00000364891 107 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 RNU4-12P-201ENST00000365233 139 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 RNU6-110P-201ENST00000384508 104 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 AF228730.1-201ENST00000397972 663 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 RPL21P1-201ENST00000399532 476 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 AC105758.1-201ENST00000506038 399 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 AC117522.1-201ENST00000509821 380 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 AC116347.2-201ENST00000514912 523 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 RNA5SP255-201ENST00000516370 107 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 TPRKBP2-201ENST00000565969 475 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 AC097478.2-201ENST00000610572 514 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 MIR6788-201ENST00000618842 66 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 SNORD3E-202ENST00000627253 216 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 AC106858.1-201ENST00000637497 429 ntBASIC0.47□□□□□ -2.33
VPS29Q9UBQ0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 snoU2-30.2-201ENST00000362805 70 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 RNU6-552P-201ENST00000362869 119 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 SNORD32A-201ENST00000364805 84 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 Y_RNA.363-201ENST00000365529 113 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 RNU6-969P-201ENST00000383900 105 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 RNU6-641P-201ENST00000384006 107 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 RNA5SP109-201ENST00000391010 116 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 MIR548J-201ENST00000408833 112 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 RNU2-39P-201ENST00000410604 198 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AC137499.1-201ENST00000427602 88 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 CETN4P-201ENST00000432407 469 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AC016550.1-201ENST00000505348 785 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 RNA5SP121-201ENST00000516537 101 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AC092451.2-201ENST00000538746 658 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AL513534.2-201ENST00000603836 250 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AL031281.1-201ENST00000604049 488 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 Z98751.3-201ENST00000604447 521 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AL353765.1-201ENST00000605514 183 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AC013244.3-201ENST00000605614 388 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AC019226.2-201ENST00000625973 424 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms