Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AL513423.1-201ENST00000621695 132 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 U4.7-201ENST00000638126 106 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 MIRLET7D-201ENST00000362263 87 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 snoU2-30.2-201ENST00000362805 70 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 Y_RNA.132-201ENST00000363421 102 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 RNU6-560P-201ENST00000364007 108 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 RNU4-56P-201ENST00000364700 142 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 RNU6-877P-201ENST00000383868 107 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 SNORD116-13-201ENST00000384408 92 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 MIR936-201ENST00000401264 98 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 MTND4P3-201ENST00000417829 541 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 AC108740.1-201ENST00000498629 225 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 AC022493.2-201ENST00000506122 481 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 RNU1-86P-201ENST00000516108 154 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 RNU1-107P-201ENST00000516617 154 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 ZNF321P-202ENST00000550843 495 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 AC087883.1-201ENST00000551882 391 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 DEFB131E-202ENST00000602581 683 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 MTATP6P2-201ENST00000603319 678 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 AC080078.2-201ENST00000603766 501 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 AC136475.10-201ENST00000620253 385 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 AC068880.4-201ENST00000623082 495 ntBASIC0.12□□□□□ -2.39
COMMD3Q9UBI1 AL589743.1-201ENST00000551932 2712 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 MIR216A-201ENST00000385063 110 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 SNORA75.2-201ENST00000391138 150 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 SNORA75.3-201ENST00000391231 150 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 C1DP2-201ENST00000418167 426 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AL590135.1-201ENST00000422215 156 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AC019205.3-201ENST00000424573 156 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AC244670.1-201ENST00000436879 112 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AC243964.1-201ENST00000441814 261 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 MTND5P2-201ENST00000442927 1142 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AC016700.2-201ENST00000446011 156 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 C1DP4-201ENST00000455429 424 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 RNU6-1132P-201ENST00000459214 107 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AP000797.1-201ENST00000478870 387 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AC015911.1-201ENST00000495111 156 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 RNU2-10P-201ENST00000516375 211 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 SNORA31.10-201ENST00000516482 106 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AC106038.2-201ENST00000520706 568 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 EIF4A1P12-201ENST00000551910 141 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 MIR3923-201ENST00000579521 83 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 AL606834.3-201ENST00000602615 496 ntBASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
COMMD3Q9UBI1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 RNU6-527P-201ENST00000363425 104 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 RNU6-43P-201ENST00000384302 107 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 SNORD89-201ENST00000390981 114 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 RNA5SP109-201ENST00000391010 116 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 RNU6-1245P-201ENST00000411130 106 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AC019070.1-201ENST00000415008 1024 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 RPL22P18-201ENST00000417197 377 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 RPS25P9-201ENST00000435591 252 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 HMGN2P34-201ENST00000437647 269 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 U7.7-201ENST00000459276 60 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AL163973.1-201ENST00000484753 577 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AC079395.1-201ENST00000510981 262 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 RNU6-947P-201ENST00000516264 106 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 RNA5SP220-201ENST00000516298 104 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AL357312.1-201ENST00000603879 298 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 Z98751.3-201ENST00000604447 521 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 PRELID3BP2-201ENST00000605362 201 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AC012467.1-201ENST00000607740 256 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AP002782.1-201ENST00000623107 614 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AC097372.5-201ENST00000623665 376 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 Z69720.2-201ENST00000624755 279 ntBASIC0.1□□□□□ -2.39
COMMD3Q9UBI1 AC027514.1-201ENST00000588561 1603 ntBASIC0.09□□□□□ -2.39
COMMD3Q9UBI1 RNU4-76P-201ENST00000364509 141 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 RNU6-224P-201ENST00000384055 107 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 RNU6-342P-201ENST00000384521 104 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AL034345.1-201ENST00000407768 123 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 RNA5SP193-201ENST00000410353 107 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AC078809.1-201ENST00000427601 140 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 DAP3P1-201ENST00000441522 278 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 RPS20P10-201ENST00000451209 253 ntBASIC0.09□□□□□ -2.4
COMMD3Q9UBI1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms