Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RNU6-546P-201ENST00000383991 107 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 AL358453.1-201ENST00000422522 250 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 AC009238.1-201ENST00000442165 424 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 AC009237.6-201ENST00000446969 424 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 AC103975.1-201ENST00000482506 483 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 RPL23AP75-201ENST00000491601 451 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.63□□□□□ -1.83
USP35Q9P2H5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.63□□□□□ -1.83
USP35Q9P2H5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.63□□□□□ -1.83
USP35Q9P2H5 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.63□□□□□ -1.83
USP35Q9P2H5 AC022616.8-201ENST00000533569 253 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.63□□□□□ -1.83
USP35Q9P2H5 MIR4658-201ENST00000584344 65 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 AC009994.1-201ENST00000606889 253 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.63□□□□□ -1.83
USP35Q9P2H5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.63□□□□□ -1.83
USP35Q9P2H5 ZNF299P-201ENST00000406845 1804 ntBASIC3.63□□□□□ -1.83
USP35Q9P2H5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
USP35Q9P2H5 RNU6-1059P-201ENST00000363752 98 ntBASIC3.62□□□□□ -1.83
USP35Q9P2H5 MIR592-201ENST00000384959 97 ntBASIC3.62□□□□□ -1.83
USP35Q9P2H5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.62□□□□□ -1.83
USP35Q9P2H5 AC243428.1-201ENST00000421099 264 ntBASIC3.62□□□□□ -1.83
USP35Q9P2H5 MTND4P17-201ENST00000470444 350 ntBASIC3.62□□□□□ -1.83
USP35Q9P2H5 AF186996.7-201ENST00000492781 209 ntBASIC3.62□□□□□ -1.83
USP35Q9P2H5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.62□□□□□ -1.83
USP35Q9P2H5 Y_RNA.670-201ENST00000516255 105 ntBASIC3.62□□□□□ -1.83
USP35Q9P2H5 RNU6-277P-201ENST00000516272 106 ntBASIC3.62□□□□□ -1.83
USP35Q9P2H5 RPL17P51-201ENST00000605218 238 ntBASIC3.62□□□□□ -1.83
USP35Q9P2H5 AC063943.3-201ENST00000615562 356 ntBASIC3.62□□□□□ -1.83
USP35Q9P2H5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
USP35Q9P2H5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.61□□□□□ -1.83
USP35Q9P2H5 AC092593.1-201ENST00000515413 1815 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 KPNA2P1-201ENST00000458289 1591 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 Y_RNA.70-201ENST00000362886 110 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 SNORD115-32-201ENST00000364079 82 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 MIR208B-201ENST00000401172 77 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 MIR1294-201ENST00000408503 142 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 RNU2-32P-201ENST00000411193 191 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 OR2AQ1P-201ENST00000451972 200 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.61□□□□□ -1.83
USP35Q9P2H5 RNU6-507P-201ENST00000516045 100 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 RNU6-307P-201ENST00000516743 106 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 AC005899.2-201ENST00000584353 90 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 7SK.7-201ENST00000603504 247 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 AC090115.4-201ENST00000609970 188 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 PISRT1.1-201ENST00000616930 107 ntBASIC3.61□□□□□ -1.83
USP35Q9P2H5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.61□□□□□ -1.83
USP35Q9P2H5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.61□□□□□ -1.83
USP35Q9P2H5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.6□□□□□ -1.83
USP35Q9P2H5 VTRNA1-1-201ENST00000363120 99 ntBASIC3.6□□□□□ -1.83
USP35Q9P2H5 SNORA25B-201ENST00000365507 128 ntBASIC3.6□□□□□ -1.83
USP35Q9P2H5 Y_RNA.387-201ENST00000383918 102 ntBASIC3.6□□□□□ -1.83
USP35Q9P2H5 MT-TD-201ENST00000387419 68 ntBASIC3.6□□□□□ -1.83
USP35Q9P2H5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
USP35Q9P2H5 AC087477.1-201ENST00000465747 340 ntBASIC3.6□□□□□ -1.83
USP35Q9P2H5 AC018868.1-201ENST00000491307 315 ntBASIC3.6□□□□□ -1.83
USP35Q9P2H5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.6□□□□□ -1.83
USP35Q9P2H5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.6□□□□□ -1.83
USP35Q9P2H5 AC009229.3-201ENST00000608056 282 ntBASIC3.6□□□□□ -1.83
USP35Q9P2H5 AC010297.1-201ENST00000623948 149 ntBASIC3.6□□□□□ -1.83
USP35Q9P2H5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP35Q9P2H5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
USP35Q9P2H5 RNU6-595P-201ENST00000363944 107 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 RNU6-378P-201ENST00000384324 107 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 MIR764-201ENST00000390811 85 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 RNU4-14P-201ENST00000410858 122 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.59□□□□□ -1.83
USP35Q9P2H5 USMG5P1-201ENST00000425964 177 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 IFNA11P-201ENST00000446352 526 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.59□□□□□ -1.83
USP35Q9P2H5 RN7SKP210-201ENST00000459176 261 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 FO393415.2-201ENST00000480085 343 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.59□□□□□ -1.83
USP35Q9P2H5 MIR5690-201ENST00000583739 73 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 RMST_6.1-201ENST00000611980 203 ntBASIC3.59□□□□□ -1.83
USP35Q9P2H5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.59□□□□□ -1.83
USP35Q9P2H5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP35Q9P2H5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
USP35Q9P2H5 Y_RNA.384-201ENST00000383909 102 ntBASIC3.58□□□□□ -1.84
USP35Q9P2H5 RNU6-611P-201ENST00000384276 104 ntBASIC3.58□□□□□ -1.84
USP35Q9P2H5 SNORA75.4-201ENST00000391278 119 ntBASIC3.58□□□□□ -1.84
USP35Q9P2H5 MIR1289-2-201ENST00000408360 111 ntBASIC3.58□□□□□ -1.84
USP35Q9P2H5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.58□□□□□ -1.84
USP35Q9P2H5 CYCSP26-201ENST00000534107 320 ntBASIC3.58□□□□□ -1.84
USP35Q9P2H5 NDUFA5P6-201ENST00000542110 379 ntBASIC3.58□□□□□ -1.84
USP35Q9P2H5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.58□□□□□ -1.84
USP35Q9P2H5 RPS3AP23-202ENST00000574601 686 ntBASIC3.58□□□□□ -1.84
USP35Q9P2H5 ZNF861P-201ENST00000588126 639 ntBASIC3.58□□□□□ -1.84
USP35Q9P2H5 AC025754.2-201ENST00000606491 432 ntBASIC3.58□□□□□ -1.84
USP35Q9P2H5 MIR1302-1-201ENST00000637932 143 ntBASIC3.58□□□□□ -1.84
USP35Q9P2H5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP35Q9P2H5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
USP35Q9P2H5 Y_RNA.533-201ENST00000384596 114 ntBASIC3.57□□□□□ -1.84
USP35Q9P2H5 RNU2-41P-201ENST00000410991 178 ntBASIC3.57□□□□□ -1.84
USP35Q9P2H5 RNU6-370P-201ENST00000411008 104 ntBASIC3.57□□□□□ -1.84
USP35Q9P2H5 snoU13.6-201ENST00000458785 104 ntBASIC3.57□□□□□ -1.84
USP35Q9P2H5 SRIP1-201ENST00000489235 288 ntBASIC3.57□□□□□ -1.84
USP35Q9P2H5 AC034114.1-201ENST00000520293 285 ntBASIC3.57□□□□□ -1.84
USP35Q9P2H5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms