Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 MTCYBP2-201ENST00000407745 171 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 MIR449C-201ENST00000516047 92 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 RNU6-277P-201ENST00000516272 106 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 CBX3P8-201ENST00000532412 525 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 FRG2DP-202ENST00000566967 323 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 AL355375.2-201ENST00000574825 175 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 AL669831.3-213ENST00000636676 183 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 AC112487.2-201ENST00000637950 304 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 RNU4-9P-201ENST00000364951 139 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 Y_RNA.387-201ENST00000383918 102 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 Y_RNA.404-201ENST00000383978 102 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 RNA5SP210-201ENST00000391034 120 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 MIR1294-201ENST00000408503 142 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 RNA5SP201-201ENST00000410316 124 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 HMGN2P35-201ENST00000412164 270 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 OOSP1P1-201ENST00000423265 274 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 Z82188.1-201ENST00000436709 154 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 MIR3162-201ENST00000581818 82 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 MIR5690-201ENST00000583739 73 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 U4atac.1-201ENST00000618345 95 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 MTND4LP32-201ENST00000636111 270 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 ZNF299P-201ENST00000406845 1804 ntBASIC2.47□□□□□ -2.01
HCN3Q9P1Z3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.46□□□□□ -2.01
HCN3Q9P1Z3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 SNORA25B-201ENST00000365507 128 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 DEFA7P-201ENST00000382676 285 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 RNU6-1297P-201ENST00000384415 104 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 MIR32-201ENST00000384965 70 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 AL358453.1-201ENST00000422522 250 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 USMG5P1-201ENST00000425964 177 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 CBX3P6-201ENST00000430257 527 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 SNRPEP8-201ENST00000442866 260 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 RNA5SP384-201ENST00000516615 116 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 MIR5696-201ENST00000578474 85 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 AC137590.2-201ENST00000619709 240 ntBASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HCN3Q9P1Z3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.604-201ENST00000410574 102 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 AL353997.1-201ENST00000432936 108 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 AC011816.1-201ENST00000441346 546 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 RPL30P15-201ENST00000457129 321 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 SNORA4.4-201ENST00000515921 135 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.675-201ENST00000516389 149 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 SCARNA16.2-201ENST00000516520 172 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 RNU6-667P-201ENST00000517186 102 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 AC022616.8-201ENST00000533569 253 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 APOOP3-201ENST00000536787 586 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 AC090517.1-201ENST00000569307 266 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 AC010928.2-201ENST00000588017 287 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 AC010297.1-201ENST00000623948 149 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 SCARNA4-201ENST00000629045 128 ntBASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HCN3Q9P1Z3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.67-201ENST00000362870 100 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 RNU6-1188P-201ENST00000363795 107 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 SNORD32B-201ENST00000364460 84 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.259-201ENST00000364619 101 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 AC243428.1-201ENST00000421099 264 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 OR2AQ1P-201ENST00000451972 200 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 snoU13.30-201ENST00000458951 104 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 AC068781.1-201ENST00000488231 618 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 FGF7P4-201ENST00000509595 295 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 MTND3P22-201ENST00000510932 243 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 RNU6-307P-201ENST00000516743 106 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 AL590705.4-201ENST00000532209 134 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms