Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC009318.2-201ENST00000610917 651 ntBASIC2.75□□□□□ -1.97
NCKIPSDQ9NZQ3 U4.1-201ENST00000620349 87 ntBASIC2.75□□□□□ -1.97
NCKIPSDQ9NZQ3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.75□□□□□ -1.97
NCKIPSDQ9NZQ3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.75□□□□□ -1.97
NCKIPSDQ9NZQ3 AC241585.2-209ENST00000638217 143 ntBASIC2.75□□□□□ -1.97
NCKIPSDQ9NZQ3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NCKIPSDQ9NZQ3 AC005592.1-201ENST00000566527 1640 ntBASIC2.75□□□□□ -1.97
NCKIPSDQ9NZQ3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 RNY1P16-201ENST00000363063 111 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.176-201ENST00000363815 109 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.455-201ENST00000384230 98 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 RNU6-574P-201ENST00000384265 107 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.527-201ENST00000384573 102 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.557-201ENST00000384680 107 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.645-201ENST00000391229 102 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 RPL21P75-201ENST00000396599 483 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 RPL21P28-201ENST00000401418 483 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.618-201ENST00000410949 107 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 EIF4EP2-201ENST00000422816 654 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 Z96811.1-201ENST00000445880 108 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 RPL21P39-201ENST00000463605 483 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 AC087190.1-201ENST00000484462 480 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 RPL17P19-201ENST00000489069 552 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 AC093591.1-201ENST00000491435 481 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 RPL21P16-201ENST00000495531 483 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 SNORA25.11-201ENST00000515935 105 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 RNU4-77P-201ENST00000516692 156 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 SNORA31.23-201ENST00000517219 133 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 AC079600.2-201ENST00000550076 130 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 AC105137.2-201ENST00000569073 466 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 MIR5701-3-201ENST00000578890 82 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 AC103810.1-201ENST00000579873 453 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 MIR4273-201ENST00000582824 84 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 MIR3670-2-201ENST00000582974 65 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 MIR3670-1-201ENST00000584160 65 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 MIR3670-3-201ENST00000584855 65 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 MIR5701-1-201ENST00000585138 82 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 RPL23AP88-201ENST00000605759 454 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 SNORD58B-201ENST00000607313 66 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 MIR3670-4-201ENST00000612260 65 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 MIR5701-2-201ENST00000615634 82 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 IGHVIII-44-202ENST00000636235 289 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 MTND5P9-201ENST00000503854 1755 ntBASIC2.74□□□□□ -1.97
NCKIPSDQ9NZQ3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.47-201ENST00000362697 108 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 RNU6-227P-201ENST00000362865 103 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 SNORD114-19-201ENST00000363072 75 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 RNU6-595P-201ENST00000363944 107 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 RNA5SP126-201ENST00000365092 109 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 RNU6-487P-201ENST00000365430 104 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.485-201ENST00000384395 102 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 MT-TG-201ENST00000387429 68 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AL138827.1-201ENST00000402666 306 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 RPL19P1-201ENST00000411635 428 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 HMGB3P2-201ENST00000411913 584 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC096644.2-201ENST00000429278 159 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC108059.2-201ENST00000434626 151 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC243964.1-201ENST00000441814 261 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC007969.2-201ENST00000441891 191 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AL731563.1-201ENST00000442202 214 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AL031659.1-201ENST00000447075 539 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 MRPS35P2-201ENST00000508242 191 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC091874.1-201ENST00000511402 339 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC096725.1-201ENST00000514266 313 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 RNA5SP112-201ENST00000515937 99 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC026241.1-201ENST00000517873 2142 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AL161670.1-201ENST00000554348 137 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 VN1R107P-201ENST00000601784 209 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC092447.9-201ENST00000603395 144 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC013412.1-201ENST00000610687 192 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC024581.2-201ENST00000619986 252 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC007792.1-201ENST00000623023 402 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 AC010329.5-201ENST00000623497 2174 ntBASIC2.73□□□□□ -1.97
NCKIPSDQ9NZQ3 ZNF299P-201ENST00000406845 1804 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 Z75746.1-201ENST00000440243 2080 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.39-201ENST00000362620 98 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.123-201ENST00000363338 102 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 Y_RNA.193-201ENST00000363979 102 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 RNY3P11-201ENST00000364153 102 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms