Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU6-1127P-201ENST00000384580 107 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 RNU6-297P-201ENST00000384636 107 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 RNY3P10-201ENST00000384764 102 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 SNORA16.2-201ENST00000390991 127 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 SNORA12.2-201ENST00000391040 156 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
TREX1Q9NSU2 RPS29P13-201ENST00000402041 169 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 RNU2-9P-201ENST00000410194 145 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 RNA5SP201-201ENST00000410316 124 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.17□□□□□ -2.22
TREX1Q9NSU2 AL117339.3-201ENST00000418733 162 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 EBAG9P1-201ENST00000418955 543 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 Z82205.1-201ENST00000428456 297 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.17□□□□□ -2.22
TREX1Q9NSU2 SNRPGP9-201ENST00000456025 225 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.17□□□□□ -2.22
TREX1Q9NSU2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.17□□□□□ -2.22
TREX1Q9NSU2 SNORA25.17-201ENST00000517184 124 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.17□□□□□ -2.22
TREX1Q9NSU2 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.17□□□□□ -2.22
TREX1Q9NSU2 AL356157.2-201ENST00000605122 111 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 AC136475.10-201ENST00000620253 385 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
TREX1Q9NSU2 AC068205.3-201ENST00000636385 468 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.17□□□□□ -2.22
TREX1Q9NSU2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TREX1Q9NSU2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 Y_RNA.201-201ENST00000364052 96 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 RNU6-266P-201ENST00000364225 107 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 RNU6-296P-201ENST00000384608 107 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.16□□□□□ -2.22
TREX1Q9NSU2 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AL133396.1-201ENST00000432048 687 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 SNAP23P1-201ENST00000433229 246 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.16□□□□□ -2.22
TREX1Q9NSU2 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 SNORD42A-201ENST00000459584 64 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AC079140.5-201ENST00000507882 310 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AC091874.1-201ENST00000511402 339 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 TRMT112P2-201ENST00000512910 132 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AP002963.1-201ENST00000530590 184 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.16□□□□□ -2.22
TREX1Q9NSU2 EIF4A1P12-201ENST00000551910 141 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.16□□□□□ -2.22
TREX1Q9NSU2 VN1R107P-201ENST00000601784 209 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AL050343.2-201ENST00000607338 280 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 AC100821.1-201ENST00000523153 2479 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 MTND5P9-201ENST00000503854 1755 ntBASIC1.16□□□□□ -2.22
TREX1Q9NSU2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
TREX1Q9NSU2 RNU4-21P-201ENST00000362802 126 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 RNU6-181P-201ENST00000363225 107 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 SNORD31B-201ENST00000364977 69 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 SNORA36A-201ENST00000384221 132 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 MIR520A-201ENST00000384862 85 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 MIR208B-201ENST00000401172 77 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 RPL37P10-201ENST00000412884 288 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AL365203.2-201ENST00000423444 196 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AC133104.1-201ENST00000429100 218 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 UBE2V1P8-201ENST00000437166 265 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 HSPE1P9-201ENST00000440046 311 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 RPL9P9-202ENST00000466501 579 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AL163973.1-201ENST00000484753 577 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 RNU6-445P-201ENST00000516949 107 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AC069113.1-201ENST00000517763 267 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AC060788.1-201ENST00000521318 469 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AGGF1P4-201ENST00000568249 801 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AC090517.1-201ENST00000569307 266 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AC005668.1-201ENST00000571142 476 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 SNORA59B-202ENST00000578183 701 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 Z98751.3-201ENST00000604447 521 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AC008536.2-201ENST00000607284 349 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AL360219.1-201ENST00000610230 366 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AC091931.1-201ENST00000623488 728 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 ICE2P2-201ENST00000483823 2787 ntBASIC1.15□□□□□ -2.23
TREX1Q9NSU2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
TREX1Q9NSU2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 SNORD33-201ENST00000362761 85 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 RNU6-862P-201ENST00000362804 105 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms