Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MIR4753-201ENST00000585119 83 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AL031281.1-201ENST00000604049 488 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AL645939.4-201ENST00000604495 135 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AC091304.9-201ENST00000612091 226 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 MIR8054-201ENST00000620877 86 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AL513423.1-201ENST00000621695 132 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AC009878.1-201ENST00000621819 340 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AC034229.5-201ENST00000624258 185 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AL603839.4-201ENST00000624658 1005 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 ELL2P3-201ENST00000457883 1602 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-827P-201ENST00000365553 106 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 SNORA67.5-201ENST00000391036 107 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AP000275.1-201ENST00000411943 390 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AL157398.1-201ENST00000452981 186 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AL162395.1-201ENST00000457882 422 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 HMGB1P29-201ENST00000505659 499 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 RNU7-128P-201ENST00000517247 62 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AP000811.1-201ENST00000603803 651 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AC091805.2-201ENST00000603848 235 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 PRELID3BP2-201ENST00000605362 201 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AL157392.4-201ENST00000609756 345 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 AC106754.2-201ENST00000623006 233 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 MTND4P5-201ENST00000435821 1374 ntBASIC0.3□□□□□ -2.36
CDC42SE1Q9NRR8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 SNORA5B-201ENST00000363786 132 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-1335P-201ENST00000365426 107 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 Y_RNA.367-201ENST00000365544 101 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 MIR660-201ENST00000385235 97 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 MIR549A-201ENST00000385268 96 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 SNORA75.2-201ENST00000391138 150 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-1093P-201ENST00000391194 107 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 SNORA75.3-201ENST00000391231 150 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 MRPL42P2-201ENST00000403169 426 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 RN7SKP200-201ENST00000410564 320 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 MTND3P17-201ENST00000416968 344 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AC090960.1-201ENST00000421072 306 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AL365184.2-201ENST00000431139 435 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AC091951.3-201ENST00000504093 246 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AF131216.2-201ENST00000512316 564 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-1146P-201ENST00000516282 102 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 Y_RNA.672-201ENST00000516289 104 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 MTCO3P23-201ENST00000561363 289 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AC005562.2-201ENST00000618264 111 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AC006001.4-201ENST00000622243 395 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AC022418.1-201ENST00000624118 445 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 AC018630.2-201ENST00000534866 2403 ntBASIC0.29□□□□□ -2.36
CDC42SE1Q9NRR8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 RNU4-76P-201ENST00000364509 141 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 RNU4-12P-201ENST00000365233 139 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 SNORA67.2-201ENST00000384300 149 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-440P-201ENST00000390882 105 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 NFU1P2-201ENST00000448700 469 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 MTATP6P14-201ENST00000455189 673 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 snoU13.6-201ENST00000458785 104 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 snoU13.25-201ENST00000458945 104 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 snoU109.3-201ENST00000459477 145 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC103987.1-201ENST00000473394 348 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC117454.1-201ENST00000491120 168 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC079382.1-201ENST00000493346 557 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC113410.1-201ENST00000505029 247 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AK3P2-201ENST00000507976 429 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC116337.1-201ENST00000509680 687 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 RNU2-69P-201ENST00000516061 100 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-917P-201ENST00000516294 104 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC090049.2-201ENST00000550377 109 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 DNAJC19P9-201ENST00000555084 351 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AL391840.1-201ENST00000571144 367 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 MIR4775-201ENST00000581168 75 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC005771.1-201ENST00000585581 349 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 SRGNP1-201ENST00000603392 451 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms