Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC020550.1-201ENST00000447385 163 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 MRPL42P4-201ENST00000453267 443 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 MTND1P9-201ENST00000453775 944 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 RNU7-165P-201ENST00000458864 60 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 AC104629.1-201ENST00000494226 508 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 MIR3612-201ENST00000579753 87 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 MIR4300-201ENST00000581016 96 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 AC025449.1-201ENST00000603896 529 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 AC096720.1-201ENST00000604441 183 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 MIR3666-201ENST00000607845 111 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 AL603839.4-201ENST00000624658 1005 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-1.11□□□□□ -2.59
SMCO4Q9NRQ5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.11□□□□□ -2.59
SMCO4Q9NRQ5 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-1.11□□□□□ -2.59
SMCO4Q9NRQ5 AC121161.1-201ENST00000510606 652 ntBASIC-1.11□□□□□ -2.59
SMCO4Q9NRQ5 AC025678.1-201ENST00000567861 338 ntBASIC-1.11□□□□□ -2.59
SMCO4Q9NRQ5 RNU6-438P-201ENST00000365561 103 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 SNORA4.3-201ENST00000365564 137 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 RNU6-269P-201ENST00000391077 97 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 RNU6-57P-201ENST00000411348 103 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 AC013262.1-201ENST00000426710 252 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 ZNF886P-201ENST00000450781 723 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 AC091860.1-201ENST00000505723 432 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 AC093027.1-201ENST00000546698 429 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 SNORA59B-202ENST00000578183 701 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 AC234772.3-201ENST00000602277 528 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 AL670379.3-201ENST00000605040 251 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 AL513423.1-201ENST00000621695 132 ntBASIC-1.12□□□□□ -2.59
SMCO4Q9NRQ5 SNORD32B-201ENST00000364460 84 ntBASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 RNU6-1078P-201ENST00000364522 103 ntBASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 Y_RNA.412-201ENST00000384001 104 ntBASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 RNA5SP109-201ENST00000391010 116 ntBASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 RNU2-59P-201ENST00000410482 191 ntBASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 AL121578.1-201ENST00000428051 892 ntBASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 Y_RNA.676-201ENST00000516393 96 ntBASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 RNU6-572P-201ENST00000516724 80 ntBASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 SNRPGP1-201ENST00000553864 222 ntBASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 AC092656.1-203ENST00000624134 423 ntBASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
SMCO4Q9NRQ5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 MIR101-1-201ENST00000362265 75 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 RNU4-84P-201ENST00000364200 139 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 SNORA8.2-201ENST00000384372 139 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 MIR525-201ENST00000384978 85 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 SNORD75.1-201ENST00000408373 60 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 RNA5SP451-201ENST00000410588 110 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 AC005534.2-201ENST00000431047 433 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 TMEM251P1-201ENST00000503717 318 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 AC110760.3-202ENST00000515177 371 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 AC093519.1-201ENST00000566109 298 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 MIR5697-201ENST00000578045 78 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 CTHRC1P1-201ENST00000605383 469 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 AC004832.4-201ENST00000608952 331 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 AC007014.2-201ENST00000615581 479 ntBASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-1.14□□□□□ -2.59
SMCO4Q9NRQ5 RNU6-199P-201ENST00000362954 107 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 RNU4-46P-201ENST00000410818 138 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 AL050341.1-201ENST00000447743 313 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 PAXBP1P1-201ENST00000449315 447 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 AL133217.1-201ENST00000450980 425 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 RPS29P15-201ENST00000458329 171 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 RNU6-416P-201ENST00000516265 103 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 RNA5SP94-201ENST00000516917 108 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 AL096861.1-201ENST00000610899 123 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 AL359697.1-201ENST00000624879 587 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 AC019226.1-201ENST00000625666 515 ntBASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.15□□□□□ -2.59
SMCO4Q9NRQ5 MIR1-1-201ENST00000362147 71 ntBASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 Y_RNA.362-201ENST00000365518 110 ntBASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 Y_RNA.548-201ENST00000384656 105 ntBASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 SNORD111-201ENST00000408139 94 ntBASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 MRPS36P1-201ENST00000421291 307 ntBASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 STAG3L5P-204ENST00000443759 179 ntBASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 TPT1P7-201ENST00000458300 517 ntBASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 LINC01399-202ENST00000458450 244 ntBASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 NDUFA4P2-201ENST00000489989 244 ntBASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 MIR6759-201ENST00000638110 65 ntBASIC-1.16□□□□□ -2.6
SMCO4Q9NRQ5 SNORD115-24-201ENST00000363528 82 ntBASIC-1.17□□□□□ -2.6
SMCO4Q9NRQ5 RNU6-674P-201ENST00000363831 107 ntBASIC-1.17□□□□□ -2.6
SMCO4Q9NRQ5 MIR613-201ENST00000385248 95 ntBASIC-1.17□□□□□ -2.6
SMCO4Q9NRQ5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.17□□□□□ -2.6
SMCO4Q9NRQ5 AC010376.1-201ENST00000522101 334 ntBASIC-1.17□□□□□ -2.6
SMCO4Q9NRQ5 AC007751.1-201ENST00000529260 376 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms