Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RNA5SP125-201ENST00000364843 120 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HINT3Q9NQE9 DEFA7P-201ENST00000382676 285 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 RNU6-1040P-201ENST00000383974 107 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 RNU6-378P-201ENST00000384324 107 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 MIR95-201ENST00000385072 81 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 SNORA46.1-201ENST00000391069 153 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 MIR208B-201ENST00000401172 77 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 RNU2-25P-201ENST00000411041 191 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 RPS20P15-201ENST00000412792 311 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.37□□□□□ -2.03
HINT3Q9NQE9 AL590556.1-201ENST00000423231 483 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.37□□□□□ -2.03
HINT3Q9NQE9 MTCO3P29-201ENST00000432119 779 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 OR2AQ1P-201ENST00000451972 200 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.37□□□□□ -2.03
HINT3Q9NQE9 AC027575.1-201ENST00000481064 460 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 RPL17P19-201ENST00000489069 552 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 SRIP1-201ENST00000489235 288 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 CKS1BP2-201ENST00000497342 240 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 RNU7-175P-201ENST00000515915 61 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 RNU6-264P-201ENST00000517134 104 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.37□□□□□ -2.03
HINT3Q9NQE9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.37□□□□□ -2.03
HINT3Q9NQE9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.37□□□□□ -2.03
HINT3Q9NQE9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.37□□□□□ -2.03
HINT3Q9NQE9 PCGEM1.1-201ENST00000613431 131 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 AC137590.2-201ENST00000619709 240 ntBASIC2.37□□□□□ -2.03
HINT3Q9NQE9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HINT3Q9NQE9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HINT3Q9NQE9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HINT3Q9NQE9 AC073544.1-201ENST00000600110 1595 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 RNU6-1159P-201ENST00000362933 107 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 Y_RNA.111-201ENST00000363248 100 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 RNA5SP240-201ENST00000365355 128 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 Y_RNA.405-201ENST00000383979 100 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 Y_RNA.451-201ENST00000384200 100 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 U8.10-201ENST00000384260 133 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 Y_RNA.524-201ENST00000384564 100 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 Y_RNA.561-201ENST00000384694 100 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 MIR32-201ENST00000384965 70 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 MIR559-201ENST00000385188 96 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 AL139095.1-201ENST00000404326 391 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 RNU2-63P-201ENST00000410792 194 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 RNA5SP21-201ENST00000410917 96 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 RPS26P42-201ENST00000413485 326 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.36□□□□□ -2.03
HINT3Q9NQE9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.36□□□□□ -2.03
HINT3Q9NQE9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.36□□□□□ -2.03
HINT3Q9NQE9 AC023824.2-201ENST00000566185 400 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 AC104581.2-201ENST00000572227 430 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 RMST_6.1-201ENST00000611980 203 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 AL449363.1-201ENST00000617815 186 ntBASIC2.36□□□□□ -2.03
HINT3Q9NQE9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.36□□□□□ -2.03
HINT3Q9NQE9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HINT3Q9NQE9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HINT3Q9NQE9 U3.9-201ENST00000363823 204 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 RNU6-944P-201ENST00000364023 107 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 RNU6-99P-201ENST00000364721 107 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 SNORA12.2-201ENST00000391040 156 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 RNU6-700P-201ENST00000391043 107 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 RNU6-1093P-201ENST00000391194 107 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 Y_RNA.597-201ENST00000410463 100 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.35□□□□□ -2.03
HINT3Q9NQE9 MIR2053-201ENST00000459295 91 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 AC090096.1-201ENST00000489168 390 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 RNA5SP356-201ENST00000515972 94 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 RNU6-1170P-201ENST00000515974 106 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 RN7SKP132-201ENST00000516001 208 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.35□□□□□ -2.03
HINT3Q9NQE9 CBX3P7-201ENST00000532876 502 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 AC079600.2-201ENST00000550076 130 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 EIF4A1P12-201ENST00000551910 141 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.35□□□□□ -2.03
HINT3Q9NQE9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HINT3Q9NQE9 SUB1P3-201ENST00000564581 315 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 CYP2C61P-201ENST00000604072 290 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 AL355297.2-201ENST00000604792 129 ntBASIC2.35□□□□□ -2.03
HINT3Q9NQE9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HINT3Q9NQE9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.35□□□□□ -2.03
HINT3Q9NQE9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HINT3Q9NQE9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
HINT3Q9NQE9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
HINT3Q9NQE9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
HINT3Q9NQE9 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HINT3Q9NQE9 RNU6-490P-201ENST00000362985 107 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 MIR487A-201ENST00000385009 80 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 MIR9-1-201ENST00000385198 89 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 MIR153-2-201ENST00000385225 87 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 SNORA12-201ENST00000391162 147 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 AL356057.3-201ENST00000402607 340 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 HMGN2P35-201ENST00000412164 270 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 MTCYBP10-201ENST00000424905 650 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HINT3Q9NQE9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.34□□□□□ -2.03
HINT3Q9NQE9 TOMM22P6-201ENST00000465035 409 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.34□□□□□ -2.03
HINT3Q9NQE9 SNORA48.11-201ENST00000517015 89 ntBASIC2.34□□□□□ -2.03
HINT3Q9NQE9 AC100812.1-201ENST00000607622 580 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms