Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 MIR3146-201ENST00000580367 79 ntBASIC0.14□□□□□ -2.39
MRPL40Q9NQ50 VN1R87P-201ENST00000596706 487 ntBASIC0.14□□□□□ -2.39
MRPL40Q9NQ50 AC017083.3-201ENST00000609955 700 ntBASIC0.14□□□□□ -2.39
MRPL40Q9NQ50 AC116165.2-201ENST00000616705 206 ntBASIC0.14□□□□□ -2.39
MRPL40Q9NQ50 AC093875.1-201ENST00000623688 504 ntBASIC0.14□□□□□ -2.39
MRPL40Q9NQ50 MIRLET7D-201ENST00000362263 87 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 RNU6-1335P-201ENST00000365426 107 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 SMIM11P1-201ENST00000369586 178 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 RPS3AP36-201ENST00000398190 775 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 AC119751.4-201ENST00000507498 357 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 MIR5190-201ENST00000581537 80 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 AC026741.1-201ENST00000605892 482 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 AC024940.5-201ENST00000622889 474 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 AC067863.3-201ENST00000624172 122 ntBASIC0.13□□□□□ -2.39
MRPL40Q9NQ50 MTND4P5-201ENST00000435821 1374 ntBASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 AC060773.1-201ENST00000421698 310 ntBASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 RPL31P35-201ENST00000431058 377 ntBASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 SNORA70.12-201ENST00000516084 153 ntBASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 AC011979.2-201ENST00000527568 352 ntBASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 EIF4A1P12-201ENST00000551910 141 ntBASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 AL136520.1-202ENST00000555494 763 ntBASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 AC090888.2-201ENST00000559765 1144 ntBASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 AL512347.1-201ENST00000566420 503 ntBASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 FRG1KP-201ENST00000623592 341 ntBASIC0.12□□□□□ -2.39
MRPL40Q9NQ50 Y_RNA.408-201ENST00000383987 102 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 RNU6-468P-201ENST00000384003 109 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 RNU4-22P-201ENST00000411058 166 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 AC019070.1-201ENST00000415008 1024 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 MTCYBP42-201ENST00000444653 1130 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 TRBVB-201ENST00000477100 408 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 AC112206.3-201ENST00000514578 389 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 SNORA68.3-201ENST00000515906 83 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 RNU6-922P-201ENST00000516753 99 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 AL132657.2-201ENST00000564417 358 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 SNORA59B-202ENST00000578183 701 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 CTHRC1P1-201ENST00000605383 469 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 U6.42-201ENST00000618440 107 ntBASIC0.11□□□□□ -2.39
MRPL40Q9NQ50 RNU6-190P-201ENST00000384154 102 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 RNU6-505P-201ENST00000384427 107 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 MIR32-201ENST00000384965 70 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 SNORD99-201ENST00000408612 74 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 RPS25P9-201ENST00000435591 252 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 AL031313.1-201ENST00000448435 256 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 MTND2P30-201ENST00000456663 382 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 U7.7-201ENST00000459276 60 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 AC011406.1-201ENST00000512440 370 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 RPL17P51-201ENST00000605218 238 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 RMST_7.1-201ENST00000621935 268 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 MIR338-201ENST00000636369 67 ntBASIC0.1□□□□□ -2.39
MRPL40Q9NQ50 MTND4P12-201ENST00000498999 1377 ntBASIC0.09□□□□□ -2.39
MRPL40Q9NQ50 RNU6-777P-201ENST00000364265 104 ntBASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 Y_RNA.458-201ENST00000384240 102 ntBASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 RNU6-35P-201ENST00000384530 107 ntBASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 MIR329-2-201ENST00000385029 84 ntBASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 SNORD89-201ENST00000390981 114 ntBASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 RPL22P18-201ENST00000417197 377 ntBASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 MTCO3P9-201ENST00000506989 781 ntBASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
MRPL40Q9NQ50 SNORD116-13-201ENST00000384408 92 ntBASIC0.08□□□□□ -2.4
MRPL40Q9NQ50 RNU6-1031P-201ENST00000384773 107 ntBASIC0.08□□□□□ -2.4
MRPL40Q9NQ50 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.08□□□□□ -2.4
MRPL40Q9NQ50 AL049830.1-201ENST00000468034 425 ntBASIC0.08□□□□□ -2.4
MRPL40Q9NQ50 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.08□□□□□ -2.4
MRPL40Q9NQ50 AC113347.3-201ENST00000509113 148 ntBASIC0.08□□□□□ -2.4
MRPL40Q9NQ50 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
MRPL40Q9NQ50 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
MRPL40Q9NQ50 AC092354.1-201ENST00000606057 376 ntBASIC0.08□□□□□ -2.4
MRPL40Q9NQ50 SNORD98-201ENST00000636377 67 ntBASIC0.08□□□□□ -2.4
MRPL40Q9NQ50 AC092268.1-201ENST00000342691 405 ntBASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 RN7SKP266-201ENST00000410232 287 ntBASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 MTCO1P27-201ENST00000448269 226 ntBASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 AC022364.2-201ENST00000457963 554 ntBASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 RNU7-14P-201ENST00000459331 62 ntBASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 AC106038.2-201ENST00000520706 568 ntBASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 TPRKBP2-201ENST00000565969 475 ntBASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 AC109446.1-201ENST00000566172 220 ntBASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 AC146944.4-201ENST00000602697 718 ntBASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 AL929325.1-201ENST00000603096 117 ntBASIC0.07□□□□□ -2.4
MRPL40Q9NQ50 MIR544A-201ENST00000384855 91 ntBASIC0.06□□□□□ -2.4
MRPL40Q9NQ50 MIR653-201ENST00000385279 96 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms