Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MIR6873-201ENST00000622788 63 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AL691447.3-201ENST00000635020 330 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AC080128.1-201ENST00000474389 1917 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UPF2Q9HAU5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
UPF2Q9HAU5 RBBP8P1-201ENST00000449447 1844 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 RNU6-890P-201ENST00000384121 107 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 RNU6-474P-201ENST00000384243 107 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AL133475.1-201ENST00000404414 305 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 RNU6-293P-201ENST00000411259 106 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AC079354.2-201ENST00000453523 154 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.45□□□□□ -2.02
UPF2Q9HAU5 RNU7-26P-201ENST00000458980 63 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AC097473.1-201ENST00000508142 408 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AC008413.1-201ENST00000511864 177 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AC093303.1-201ENST00000514549 295 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 SNORA31.6-201ENST00000516241 130 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 SCARNA16.2-201ENST00000516520 172 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.708-201ENST00000516950 96 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 SNORD19.2-201ENST00000516978 73 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 RNU1-54P-201ENST00000517181 120 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AC109446.1-201ENST00000566172 220 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 MIR4719-201ENST00000585233 84 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 VN1R107P-201ENST00000601784 209 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 AP001836.1-201ENST00000604675 523 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 uc_338.20-201ENST00000621563 178 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 MTND4P27-201ENST00000450813 1354 ntBASIC2.45□□□□□ -2.02
UPF2Q9HAU5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
UPF2Q9HAU5 MIR369-201ENST00000362155 70 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 RNU6-1115P-201ENST00000362490 106 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 SNORD56.1-201ENST00000362913 68 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 RNU6-596P-201ENST00000365395 98 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 MIR559-201ENST00000385188 96 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 BX276092.3-201ENST00000424182 230 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 Z82205.1-201ENST00000428456 297 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 RPS15AP10-201ENST00000432472 382 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 DAP3P1-201ENST00000441522 278 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 RPL30P15-201ENST00000457129 321 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 AC027575.1-201ENST00000481064 460 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 AC023141.11-201ENST00000508864 202 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 AP005902.1-201ENST00000521358 186 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 AC020661.2-201ENST00000560114 134 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 BNIP3P16-201ENST00000589779 534 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.44□□□□□ -2.02
UPF2Q9HAU5 AC078795.3-201ENST00000602913 472 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 AL353621.2-201ENST00000605340 133 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 AL080274.1-201ENST00000605565 220 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 SNORA43.4-201ENST00000629559 138 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
UPF2Q9HAU5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.44□□□□□ -2.02
UPF2Q9HAU5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AL359851.1-201ENST00000569460 4997 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 MTND5P30-201ENST00000452896 1731 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 RNA5SP289-201ENST00000362332 137 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.48-201ENST00000362710 103 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.187-201ENST00000363918 113 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.395-201ENST00000383945 109 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 SNORA75.6-201ENST00000391318 127 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AP000275.1-201ENST00000411943 390 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 PTGES3P4-201ENST00000426243 356 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AC236972.2-201ENST00000434979 310 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AL139109.1-201ENST00000455491 297 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.653-201ENST00000459091 95 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 CBX3P8-201ENST00000532412 525 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 MIR4513-201ENST00000581077 86 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 MIR3199-1-201ENST00000582434 88 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AC080078.3-201ENST00000605407 463 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AC005014.2-201ENST00000607795 599 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 MIR8076-201ENST00000611401 83 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AC245884.12-201ENST00000615364 59 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AL449363.1-201ENST00000617815 186 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 AL450472.1-202ENST00000637286 180 ntBASIC2.43□□□□□ -2.02
UPF2Q9HAU5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
UPF2Q9HAU5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.42□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.5-201ENST00000362334 102 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 RNU6-858P-201ENST00000362436 107 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 RNU4-82P-201ENST00000362443 140 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.31-201ENST00000362574 102 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.40-201ENST00000362645 93 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 RNU6-527P-201ENST00000363425 104 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 SNORA38-201ENST00000363946 132 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.216-201ENST00000364205 93 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.496-201ENST00000384444 101 ntBASIC2.42□□□□□ -2.02
UPF2Q9HAU5 RNU6-790P-201ENST00000384479 105 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms