Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AP000560.1-201ENST00000624150 1937 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 U3.13-201ENST00000364804 214 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AL513185.2-201ENST00000425543 193 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC078809.1-201ENST00000427601 140 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 FGF7P6-202ENST00000451282 293 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC022447.4-201ENST00000504053 364 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 RNU6-1332P-201ENST00000516666 104 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 RN7SKP256-201ENST00000517201 314 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC104576.1-201ENST00000524225 88 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC115990.1-201ENST00000526957 301 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 SCOCP1-201ENST00000554676 349 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 MIR3672-201ENST00000584290 82 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AP003465.2-201ENST00000602571 373 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC025754.2-201ENST00000606491 432 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC002553.4-201ENST00000616896 331 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AL132822.1-201ENST00000617063 513 ntBASIC1.92□□□□□ -2.1
RNF41Q9H4P4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 SNORD113-7-201ENST00000363762 77 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 SNORA25B-201ENST00000365507 128 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 Y_RNA.530-201ENST00000384587 101 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 Y_RNA.573-201ENST00000384763 105 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 MIR561-201ENST00000385216 97 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 MIR1277-201ENST00000408536 78 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 Y_RNA.619-201ENST00000410951 90 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 RNU6-373P-201ENST00000411247 98 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 RN7SKP101-201ENST00000411376 320 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 VN1R36P-201ENST00000414936 291 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 RPS15AP10-201ENST00000432472 382 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 USP9YP28-201ENST00000435142 589 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AC244670.1-201ENST00000436879 112 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AC124916.1-201ENST00000444020 547 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AMD1P1-201ENST00000457220 922 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 SNORD13-201ENST00000459299 104 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AC008628.2-201ENST00000502605 298 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.91□□□□□ -2.1
RNF41Q9H4P4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
RNF41Q9H4P4 SNORA31.16-201ENST00000516773 139 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 RNU6-612P-201ENST00000516909 102 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AP003033.1-201ENST00000527244 415 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AC018630.3-201ENST00000542637 96 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AP000907.4-201ENST00000604143 237 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AL138726.1-201ENST00000614873 333 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 AC008121.3-201ENST00000618726 433 ntBASIC1.91□□□□□ -2.1
RNF41Q9H4P4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RNF41Q9H4P4 Y_RNA.135-201ENST00000363439 95 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 RNU6-877P-201ENST00000383868 107 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 RNU6-142P-201ENST00000384019 107 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 ZNF885P-201ENST00000420174 1098 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 UBE2V1P4-201ENST00000425374 344 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.9□□□□□ -2.11
RNF41Q9H4P4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF41Q9H4P4 MTND1P11-201ENST00000456661 876 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 RPL9P9-202ENST00000466501 579 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC069439.1-201ENST00000494739 167 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC025465.4-201ENST00000513422 638 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC146944.4-201ENST00000602697 718 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC122108.2-201ENST00000611946 526 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC022202.1-201ENST00000613515 211 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC063943.3-201ENST00000615562 356 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 MIR3662-201ENST00000637030 95 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC027514.1-201ENST00000588561 1603 ntBASIC1.9□□□□□ -2.11
RNF41Q9H4P4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RNF41Q9H4P4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RNF41Q9H4P4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RNF41Q9H4P4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.89□□□□□ -2.11
RNF41Q9H4P4 RNU6-1159P-201ENST00000362933 107 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 RNU1-17P-201ENST00000363022 152 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 RNU6-1252P-201ENST00000363054 104 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 Y_RNA.100-201ENST00000363141 102 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 RNU6-1317P-201ENST00000364582 104 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 RNU6-214P-201ENST00000384130 107 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 RNU6-831P-201ENST00000384548 107 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 SNORA67.5-201ENST00000391036 107 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 RNA5SP118-201ENST00000410385 109 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 RNA5SP270-201ENST00000411361 118 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.89□□□□□ -2.11
RNF41Q9H4P4 BX510359.4-201ENST00000423750 193 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 IFNA20P-201ENST00000436840 528 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 MTCO3P18-201ENST00000440206 761 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AC009238.1-201ENST00000442165 424 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AC009237.6-201ENST00000446969 424 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AC007547.1-201ENST00000462177 490 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms