Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SENP3Q9H4L4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SENP3Q9H4L4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SENP3Q9H4L4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.18
SENP3Q9H4L4 RNU6-1216P-201ENST00000362590 107 ntBASIC7.71□□□□□ -1.18
SENP3Q9H4L4 AC023790.1-201ENST00000482174 347 ntBASIC7.71□□□□□ -1.18
SENP3Q9H4L4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC7.71□□□□□ -1.18
SENP3Q9H4L4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SENP3Q9H4L4 AC140134.1-201ENST00000511830 3544 ntBASIC7.71□□□□□ -1.18
SENP3Q9H4L4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
SENP3Q9H4L4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SENP3Q9H4L4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC7.71□□□□□ -1.18
SENP3Q9H4L4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SENP3Q9H4L4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC7.7□□□□□ -1.18
SENP3Q9H4L4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.7□□□□□ -1.18
SENP3Q9H4L4 HSBP1P2-201ENST00000299671 229 ntBASIC7.7□□□□□ -1.18
SENP3Q9H4L4 Y_RNA.491-201ENST00000384417 107 ntBASIC7.7□□□□□ -1.18
SENP3Q9H4L4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.7□□□□□ -1.18
SENP3Q9H4L4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC7.7□□□□□ -1.18
SENP3Q9H4L4 MIR3064-201ENST00000581130 66 ntBASIC7.7□□□□□ -1.18
SENP3Q9H4L4 AC068724.3-201ENST00000625906 87 ntBASIC7.7□□□□□ -1.18
SENP3Q9H4L4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SENP3Q9H4L4 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.7□□□□□ -1.18
SENP3Q9H4L4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.7□□□□□ -1.18
SENP3Q9H4L4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 RNA5SP323-201ENST00000391094 133 ntBASIC7.69□□□□□ -1.18
SENP3Q9H4L4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 AL020996.3-201ENST00000606617 222 ntBASIC7.69□□□□□ -1.18
SENP3Q9H4L4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SENP3Q9H4L4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 AL138820.1-201ENST00000617901 5305 ntBASIC7.68□□□□□ -1.18
SENP3Q9H4L4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 AL359837.1-201ENST00000381357 287 ntBASIC7.68□□□□□ -1.18
SENP3Q9H4L4 RNU6-132P-201ENST00000383863 107 ntBASIC7.68□□□□□ -1.18
SENP3Q9H4L4 MIR600-201ENST00000385007 98 ntBASIC7.68□□□□□ -1.18
SENP3Q9H4L4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 RNA5SP482-201ENST00000391269 118 ntBASIC7.68□□□□□ -1.18
SENP3Q9H4L4 RNU4-83P-201ENST00000410863 133 ntBASIC7.68□□□□□ -1.18
SENP3Q9H4L4 Z98742.2-201ENST00000431564 187 ntBASIC7.68□□□□□ -1.18
SENP3Q9H4L4 RNU7-79P-201ENST00000516082 62 ntBASIC7.68□□□□□ -1.18
SENP3Q9H4L4 MIR3609-201ENST00000582661 80 ntBASIC7.68□□□□□ -1.18
SENP3Q9H4L4 AC112200.1-201ENST00000625015 234 ntBASIC7.68□□□□□ -1.18
SENP3Q9H4L4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SENP3Q9H4L4 AC083843.2-201ENST00000568248 6253 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SENP3Q9H4L4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SENP3Q9H4L4 MAPK10-270ENST00000641102 3538 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SENP3Q9H4L4 SNORA7.2-201ENST00000364446 145 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 SNORA11F-201ENST00000408237 128 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 RPL18P10-201ENST00000425606 538 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 CRIP1P1-201ENST00000427567 185 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 AC073264.2-201ENST00000448886 166 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 HSPE1P24-201ENST00000450782 238 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC7.67□□□□□ -1.18
SENP3Q9H4L4 AC015813.6-201ENST00000624409 5808 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SENP3Q9H4L4 AL591135.1-201ENST00000401578 5914 ntBASIC7.67□□□□□ -1.18
SENP3Q9H4L4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.67□□□□□ -1.18
SENP3Q9H4L4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SENP3Q9H4L4 TNPO1P3-201ENST00000436471 2662 ntBASIC7.66□□□□□ -1.18
SENP3Q9H4L4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SENP3Q9H4L4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SENP3Q9H4L4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC7.66□□□□□ -1.18
SENP3Q9H4L4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
SENP3Q9H4L4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SENP3Q9H4L4 AC021146.4-201ENST00000309229 279 ntBASIC7.66□□□□□ -1.18
SENP3Q9H4L4 RNA5SP388-201ENST00000362584 119 ntBASIC7.66□□□□□ -1.18
SENP3Q9H4L4 SNORA40.6-201ENST00000391153 128 ntBASIC7.66□□□□□ -1.18
SENP3Q9H4L4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC7.66□□□□□ -1.18
SENP3Q9H4L4 MIR8053-201ENST00000613344 75 ntBASIC7.66□□□□□ -1.18
SENP3Q9H4L4 AC092634.7-201ENST00000621022 103 ntBASIC7.66□□□□□ -1.18
SENP3Q9H4L4 AL137790.1-201ENST00000634283 177 ntBASIC7.66□□□□□ -1.18
SENP3Q9H4L4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SENP3Q9H4L4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
SENP3Q9H4L4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SENP3Q9H4L4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms