Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 MIR5739-201ENST00000619803 80 ntBASIC3.23□□□□□ -1.89
CCDC8Q9H0W5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 MIR196B-201ENST00000384852 84 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 MIR190B-201ENST00000401119 79 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 RNU6-1156P-201ENST00000410365 100 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 AL353997.1-201ENST00000432936 108 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 Z96811.1-201ENST00000445880 108 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 AC073901.1-201ENST00000462471 408 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 RPL23AP70-201ENST00000483361 460 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 RNA5SP54-201ENST00000516951 92 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 MIR2355-201ENST00000517199 87 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 AC144568.1-201ENST00000520139 137 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 AC004584.2-201ENST00000570407 410 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 AL356280.1-201ENST00000603614 379 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 AC008121.3-201ENST00000618726 433 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 AC243829.7-201ENST00000633081 225 ntBASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC8Q9H0W5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 Y_RNA.5-201ENST00000362334 102 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 RNU5F-3P-201ENST00000363767 117 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 RNA5SP240-201ENST00000365355 128 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 Y_RNA.405-201ENST00000383979 100 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 Y_RNA.445-201ENST00000384168 102 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 Y_RNA.451-201ENST00000384200 100 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 Y_RNA.524-201ENST00000384564 100 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 Y_RNA.561-201ENST00000384694 100 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 MIR548P-201ENST00000408336 84 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 RNA5SP201-201ENST00000410316 124 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 AL035666.1-201ENST00000446195 348 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 MIR2053-201ENST00000459295 91 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 RNU6-699P-201ENST00000517081 110 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 AC010928.2-201ENST00000588017 287 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 AL356055.1-201ENST00000602528 446 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 SNRPGP17-201ENST00000603780 214 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 AL138825.1-201ENST00000618587 192 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 MAPK10-266ENST00000641066 6555 ntBASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.21□□□□□ -1.9
CCDC8Q9H0W5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 MIR369-201ENST00000362155 70 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 RNU6-99P-201ENST00000364721 107 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 AC117470.1-201ENST00000381974 330 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 RNA5SP210-201ENST00000391034 120 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 RN7SKP284-201ENST00000411002 343 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 AC007215.1-201ENST00000464893 276 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 AC090096.1-201ENST00000489168 390 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 AC096725.1-201ENST00000514266 313 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 SNORA25.11-201ENST00000515935 105 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 PCGEM1.1-201ENST00000613431 131 ntBASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC8Q9H0W5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 RNU4-15P-201ENST00000362613 141 ntBASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 U3.9-201ENST00000363823 204 ntBASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 Y_RNA.364-201ENST00000365532 101 ntBASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 SNORA36A-201ENST00000384221 132 ntBASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 MIR218-1-201ENST00000384999 110 ntBASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 MIR95-201ENST00000385072 81 ntBASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 SRIP1-201ENST00000489235 288 ntBASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 EIF4A1P12-201ENST00000551910 141 ntBASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 AC116312.1-201ENST00000606841 314 ntBASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC8Q9H0W5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 Y_RNA.28-201ENST00000362554 111 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 RNU1-72P-201ENST00000362976 153 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 Y_RNA.202-201ENST00000364083 110 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 SET-203ENST00000372688 801 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 RNU6-474P-201ENST00000384243 107 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 U8.10-201ENST00000384260 133 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 MIR320B2-201ENST00000408479 138 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 SNORD88.1-201ENST00000408684 91 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 HMGB3P2-201ENST00000411913 584 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 CBX3P6-201ENST00000430257 527 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 AL353752.1-201ENST00000454946 260 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 RN7SL297P-201ENST00000483161 293 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 RNU6-911P-201ENST00000516523 104 ntBASIC3.18□□□□□ -1.9
CCDC8Q9H0W5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms