Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC080128.1-201ENST00000474389 1917 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC000403.1-201ENST00000613696 3585 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 MTND5P16-201ENST00000460269 1703 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC069528.2-201ENST00000624849 1991 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 RNU6-137P-201ENST00000363680 108 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 Y_RNA.424-201ENST00000384063 103 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 Z92545.1-201ENST00000411782 234 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 MTCO3P19-201ENST00000415864 321 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC145146.1-201ENST00000496370 254 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC008885.1-201ENST00000514930 301 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 SNORA40.14-201ENST00000516543 86 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 RNA5SP54-201ENST00000516951 92 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 MIR2355-201ENST00000517199 87 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AL360085.1-201ENST00000604713 532 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 YPEL5P2-201ENST00000605553 359 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC005520.5-201ENST00000613926 164 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC007318.2-201ENST00000620999 243 ntBASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
TRIM54Q9BYV2 AL035425.3-201ENST00000564206 4996 ntBASIC2.9□□□□□ -1.94
TRIM54Q9BYV2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 AC138915.1-201ENST00000565427 1685 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 AC073325.2-201ENST00000339545 159 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 MIR29B2-201ENST00000385055 81 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 MIR887-201ENST00000401258 79 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 HMGB3P2-201ENST00000411913 584 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 BX510359.1-201ENST00000456973 237 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 SNORA59A-201ENST00000459326 152 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 AC023141.11-201ENST00000508864 202 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 Y_RNA.721-201ENST00000517207 102 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 AC027288.2-201ENST00000553028 243 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 MIR5195-201ENST00000583555 115 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 AC016727.2-201ENST00000603988 621 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 SNORD58B-201ENST00000607313 66 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 AC138305.3-201ENST00000624988 240 ntBASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM54Q9BYV2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RNU6-222P-201ENST00000362438 107 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RNU4-15P-201ENST00000362613 141 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 U3.9-201ENST00000363823 204 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 SNORD115-8-201ENST00000363856 82 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 SNORD115-38-201ENST00000365037 82 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 SNORA9.2-201ENST00000365361 133 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 Y_RNA.485-201ENST00000384395 102 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RNU6-851P-201ENST00000384565 107 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 Y_RNA.526-201ENST00000384572 110 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RPL21P75-201ENST00000396599 483 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RPL21P28-201ENST00000401418 483 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 MIR320B2-201ENST00000408479 138 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 SNORD88.1-201ENST00000408684 91 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RNU6-101P-201ENST00000410323 104 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RPS15AP7-201ENST00000439294 405 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 Z96811.1-201ENST00000445880 108 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 CHEK2P4-201ENST00000450340 246 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 AC112492.4-201ENST00000456549 352 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RPL21P39-201ENST00000463605 483 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 AP000870.1-201ENST00000472927 406 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 AC117440.1-201ENST00000474107 571 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 AC087190.1-201ENST00000484462 480 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 AC093591.1-201ENST00000491435 481 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RPL21P16-201ENST00000495531 483 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RNU6-1114P-201ENST00000516022 107 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 RNU6-327P-201ENST00000516270 127 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 AC007536.1-201ENST00000533382 349 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 MIR4680-201ENST00000580906 66 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 MIR5188-201ENST00000583467 113 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 MIR3616-201ENST00000584070 92 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 PCGEM1.1-201ENST00000613431 131 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 ZNF72P-201ENST00000425869 1908 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 AC091812.1-201ENST00000432235 1948 ntBASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM54Q9BYV2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.88□□□□□ -1.95
TRIM54Q9BYV2 MIR422A-201ENST00000362286 90 ntBASIC2.88□□□□□ -1.95
TRIM54Q9BYV2 RNU5F-3P-201ENST00000363767 117 ntBASIC2.88□□□□□ -1.95
TRIM54Q9BYV2 RNU6-378P-201ENST00000384324 107 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms