Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 Y_RNA.400-201ENST00000383963 111 ntBASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 Y_RNA.488-201ENST00000384403 102 ntBASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 Y_RNA.497-201ENST00000384447 98 ntBASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-417P-201ENST00000384712 107 ntBASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 RNA5SP171-201ENST00000391071 115 ntBASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 MIR4286-201ENST00000580651 93 ntBASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 AC110741.2-201ENST00000605278 268 ntBASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 AC091895.1-201ENST00000624494 256 ntBASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 AC244205.2-202ENST00000635781 342 ntBASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 Y_RNA.75-201ENST00000362927 97 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 MIR3074-201ENST00000384885 81 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 MIR549A-201ENST00000385268 96 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 CBX3P9-201ENST00000402326 552 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 RNU2-2P-201ENST00000410396 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 AL365496.1-201ENST00000426885 215 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 SUMO2P18-201ENST00000518873 252 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 RNU2-4P-201ENST00000606190 192 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.15-201ENST00000611544 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.16-201ENST00000613119 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.12-201ENST00000613778 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.9-201ENST00000615427 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 AL391261.4-201ENST00000616012 481 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.11-201ENST00000616345 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.2-201ENST00000616535 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 AC006133.1-201ENST00000617106 264 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.3-201ENST00000617785 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.19-201ENST00000618602 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 RNU2-1-201ENST00000618664 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.6-201ENST00000619225 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.5-201ENST00000619465 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 U2.10-201ENST00000620268 191 ntBASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM56Q9BRZ2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-529P-201ENST00000363383 104 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 RNU1-105P-201ENST00000363470 161 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 Y_RNA.182-201ENST00000363880 111 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-324P-201ENST00000363957 106 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 Y_RNA.329-201ENST00000365209 107 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 Y_RNA.412-201ENST00000384001 104 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 MIR670-201ENST00000390142 98 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 Z98941.1-201ENST00000407764 100 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 RNA5SP201-201ENST00000410316 124 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 RN7SL542P-201ENST00000467147 294 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 AC103975.1-201ENST00000482506 483 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-479P-201ENST00000516348 105 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 RNU1-45P-201ENST00000517191 141 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 AL078604.3-201ENST00000615580 211 ntBASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM56Q9BRZ2 AC007496.3-201ENST00000624987 3443 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 RNU4-84P-201ENST00000364200 139 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-22P-201ENST00000384355 107 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-959P-201ENST00000384671 107 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 MIR554-201ENST00000384874 96 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 MIR199A2-201ENST00000385289 110 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 AL162725.1-201ENST00000435405 301 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 HMGN2P20-201ENST00000437531 273 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 AL162151.2-201ENST00000448875 158 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 RPS20P10-201ENST00000451209 253 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 RN7SL132P-201ENST00000478131 296 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-107P-201ENST00000516643 102 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 SNORA67.7-201ENST00000516664 135 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 RNU2-12P-201ENST00000517216 168 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 AC022695.1-201ENST00000522089 237 ntBASIC3.86□□□□□ -1.79
TRIM56Q9BRZ2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms