Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.33□□□□□ -2.04
SDF4Q9BRK5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.33□□□□□ -2.04
SDF4Q9BRK5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SDF4Q9BRK5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.33□□□□□ -2.04
SDF4Q9BRK5 UBL5P3-201ENST00000475112 231 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.33□□□□□ -2.04
SDF4Q9BRK5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.33□□□□□ -2.04
SDF4Q9BRK5 RPL17P51-201ENST00000605218 238 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 AC009994.1-201ENST00000606889 253 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 AC090517.2-201ENST00000614966 680 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.32□□□□□ -2.04
SDF4Q9BRK5 RNU6-1164P-201ENST00000364428 107 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SDF4Q9BRK5 RNU6-877P-201ENST00000383868 107 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 MIR17-201ENST00000385012 84 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 RNA5SP465-201ENST00000391195 109 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 AC027124.2-201ENST00000428249 105 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.32□□□□□ -2.04
SDF4Q9BRK5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.32□□□□□ -2.04
SDF4Q9BRK5 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 AC096745.1-201ENST00000509945 370 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.32□□□□□ -2.04
SDF4Q9BRK5 AL133215.3-201ENST00000609801 448 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
SDF4Q9BRK5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.32□□□□□ -2.04
SDF4Q9BRK5 AC008555.8-201ENST00000623602 2168 ntBASIC2.32□□□□□ -2.04
SDF4Q9BRK5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.31□□□□□ -2.04
SDF4Q9BRK5 MTND2P29-201ENST00000438595 412 ntBASIC2.31□□□□□ -2.04
SDF4Q9BRK5 HMGN2P18-201ENST00000450680 270 ntBASIC2.31□□□□□ -2.04
SDF4Q9BRK5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.31□□□□□ -2.04
SDF4Q9BRK5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.31□□□□□ -2.04
SDF4Q9BRK5 AC005741.1-201ENST00000511094 432 ntBASIC2.31□□□□□ -2.04
SDF4Q9BRK5 MIR449C-201ENST00000516047 92 ntBASIC2.31□□□□□ -2.04
SDF4Q9BRK5 RNU6-991P-201ENST00000516168 107 ntBASIC2.31□□□□□ -2.04
SDF4Q9BRK5 FGF7P1-201ENST00000582820 288 ntBASIC2.31□□□□□ -2.04
SDF4Q9BRK5 Y_RNA.783-201ENST00000613546 102 ntBASIC2.31□□□□□ -2.04
SDF4Q9BRK5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.31□□□□□ -2.04
SDF4Q9BRK5 AL138726.1-201ENST00000614873 333 ntBASIC2.31□□□□□ -2.04
SDF4Q9BRK5 MIR3688-2-201ENST00000636963 87 ntBASIC2.31□□□□□ -2.04
SDF4Q9BRK5 RNU5B-2P-201ENST00000363036 113 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 SNORD115-3-201ENST00000363100 82 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 Y_RNA.332-201ENST00000365271 113 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 RNU6-1286P-201ENST00000383871 107 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 Y_RNA.414-201ENST00000384011 101 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 SNORA29-201ENST00000384183 140 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 RNU6-933P-201ENST00000384424 107 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 MIR504-201ENST00000385065 83 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 MIR208B-201ENST00000401172 77 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 AL512604.1-201ENST00000404812 257 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 AL356379.1-201ENST00000414105 126 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 AC096920.1-201ENST00000423991 241 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 HMGN2P3-201ENST00000433603 273 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 HMGN2P5-201ENST00000436882 273 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 MTCO3P18-201ENST00000440206 761 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.3□□□□□ -2.04
SDF4Q9BRK5 RPS29P25-201ENST00000481709 171 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.3□□□□□ -2.04
SDF4Q9BRK5 RNU6-256P-201ENST00000516747 97 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 AC087441.2-201ENST00000529141 262 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.3□□□□□ -2.04
SDF4Q9BRK5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SDF4Q9BRK5 AL162373.1-201ENST00000620433 407 ntBASIC2.3□□□□□ -2.04
SDF4Q9BRK5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SDF4Q9BRK5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SDF4Q9BRK5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
SDF4Q9BRK5 AC009487.4-201ENST00000624969 3585 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 ZNF702P-202ENST00000434269 1966 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 RNU1-58P-201ENST00000362413 163 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 Y_RNA.135-201ENST00000363439 95 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 Y_RNA.295-201ENST00000364918 102 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 Y_RNA.453-201ENST00000384223 109 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 RNU6-784P-201ENST00000384330 106 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 AL139156.1-201ENST00000412785 841 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 RPS26P42-201ENST00000413485 326 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 BX510359.4-201ENST00000423750 193 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 UBE2V1P8-201ENST00000437166 265 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 RPL23AP3-201ENST00000453844 468 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 RNA5SP490-201ENST00000517141 136 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.29□□□□□ -2.04
SDF4Q9BRK5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SDF4Q9BRK5 Y_RNA.123-201ENST00000363338 102 ntBASIC2.28□□□□□ -2.04
SDF4Q9BRK5 Y_RNA.157-201ENST00000363638 102 ntBASIC2.28□□□□□ -2.04
SDF4Q9BRK5 RNU4-52P-201ENST00000384209 138 ntBASIC2.28□□□□□ -2.04
SDF4Q9BRK5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SDF4Q9BRK5 MIR1289-2-201ENST00000408360 111 ntBASIC2.28□□□□□ -2.04
SDF4Q9BRK5 U3.40-201ENST00000408706 208 ntBASIC2.28□□□□□ -2.04
SDF4Q9BRK5 RNU2-2P-201ENST00000410396 191 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms