Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL591043.1-201ENST00000432461 424 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.47□□□□□ -2.17
FOXC2Q99958 HSPE1P21-201ENST00000438283 308 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.47□□□□□ -2.17
FOXC2Q99958 RNU6-333P-201ENST00000459117 107 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 RNA5SP57-201ENST00000459463 123 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 AC087884.1-201ENST00000469738 328 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 AC107401.1-201ENST00000503426 685 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 AC093259.1-201ENST00000509755 300 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 RNA5SP220-201ENST00000516298 104 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 Y_RNA.693-201ENST00000516641 110 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.47□□□□□ -2.17
FOXC2Q99958 MIR3941-201ENST00000582572 103 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 MIR4452-201ENST00000583004 71 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 AC123912.5-201ENST00000605470 343 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 AC002044.1-201ENST00000606707 158 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 AL158209.2-201ENST00000619266 216 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 MIR1248-201ENST00000629190 106 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 OR5AK4P-201ENST00000635912 903 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 MIR6863-201ENST00000636112 90 ntBASIC1.47□□□□□ -2.17
FOXC2Q99958 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
FOXC2Q99958 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.46□□□□□ -2.18
FOXC2Q99958 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
FOXC2Q99958 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
FOXC2Q99958 RNU6-37P-201ENST00000362692 107 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 RNU6-105P-201ENST00000363909 104 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 RNU6-11P-201ENST00000364234 107 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 RNU6-25P-201ENST00000383873 107 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 SNORA69-201ENST00000383895 132 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 RNU6-48P-201ENST00000384161 107 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 Y_RNA.481-201ENST00000384373 102 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 RNU6-16P-201ENST00000384385 107 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 RNU6-15P-201ENST00000384534 107 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 RNU6-1222P-201ENST00000384615 107 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 RNU6-29P-201ENST00000384637 107 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 MIR514A2-201ENST00000385131 88 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 MIR514A3-201ENST00000385132 88 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 RPS29P13-201ENST00000402041 169 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.46□□□□□ -2.18
FOXC2Q99958 AL117339.3-201ENST00000418733 162 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 AL589823.1-201ENST00000429577 183 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXC2Q99958 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXC2Q99958 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXC2Q99958 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXC2Q99958 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXC2Q99958 TPTE2P5-203ENST00000458118 728 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.46□□□□□ -2.18
FOXC2Q99958 AC009646.1-201ENST00000510455 318 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXC2Q99958 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
FOXC2Q99958 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXC2Q99958 AC022880.1-201ENST00000534017 973 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.46□□□□□ -2.18
FOXC2Q99958 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.46□□□□□ -2.18
FOXC2Q99958 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.46□□□□□ -2.18
FOXC2Q99958 AL118558.2-201ENST00000556294 238 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 EIF1P4-201ENST00000572664 335 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 AC064807.4-201ENST00000607201 407 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 RMST_6.1-201ENST00000611980 203 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
FOXC2Q99958 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.46□□□□□ -2.18
FOXC2Q99958 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
FOXC2Q99958 RNU6-82P-201ENST00000363970 107 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 RNU6-743P-201ENST00000364151 106 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 RNU6-266P-201ENST00000364225 107 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 RNU4-20P-201ENST00000365601 151 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
FOXC2Q99958 Y_RNA.517-201ENST00000384551 106 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 POLHP1-201ENST00000411806 470 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.45□□□□□ -2.18
FOXC2Q99958 MTND3P21-201ENST00000433774 331 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.45□□□□□ -2.18
FOXC2Q99958 AC243964.1-201ENST00000441814 261 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 MTND1P1-201ENST00000445453 368 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.45□□□□□ -2.18
FOXC2Q99958 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.45□□□□□ -2.18
FOXC2Q99958 SRRM1P2-201ENST00000464531 1192 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 AC079140.5-201ENST00000507882 310 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.45□□□□□ -2.18
FOXC2Q99958 AC008834.1-201ENST00000511612 175 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 RNA5SP480-201ENST00000516840 109 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 CBX3P4-201ENST00000538909 354 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.45□□□□□ -2.18
FOXC2Q99958 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.45□□□□□ -2.18
FOXC2Q99958 HSBP1P1-201ENST00000555205 166 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.45□□□□□ -2.18
FOXC2Q99958 VN1R107P-201ENST00000601784 209 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 AL078603.1-201ENST00000603824 313 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 AC010900.2-201ENST00000604508 210 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 uc_338.34-201ENST00000617467 174 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 AC103705.1-201ENST00000619013 241 ntBASIC1.45□□□□□ -2.18
FOXC2Q99958 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.45□□□□□ -2.18
FOXC2Q99958 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
FOXC2Q99958 RNU6-527P-201ENST00000363425 104 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 RNU6-1285P-201ENST00000363480 105 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 RNU6-1085P-201ENST00000363576 107 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 MIR544A-201ENST00000384855 91 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms