Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC091951.3-201ENST00000504093 246 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AC116562.3-201ENST00000506136 177 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.67□□□□□ -2.3
CCL13Q99616 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.67□□□□□ -2.3
CCL13Q99616 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AC011406.1-201ENST00000512440 370 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CCL13Q99616 SCARNA16.2-201ENST00000516520 172 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 RNA5SP384-201ENST00000516615 116 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AC068587.5-201ENST00000528506 175 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.67□□□□□ -2.3
CCL13Q99616 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.67□□□□□ -2.3
CCL13Q99616 AC109446.2-201ENST00000567872 497 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.67□□□□□ -2.3
CCL13Q99616 AC013244.2-201ENST00000603396 103 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AL031281.1-201ENST00000604049 488 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AL121992.2-201ENST00000606262 256 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AL021879.1-201ENST00000611756 288 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CCL13Q99616 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AL445984.1-201ENST00000637834 659 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CCL13Q99616 AL391994.1-201ENST00000254724 282 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
CCL13Q99616 RNU6-1123P-201ENST00000362347 106 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 RNU6-552P-201ENST00000362869 119 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 RNU1-36P-201ENST00000365130 165 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 SNORD115-7-201ENST00000365306 82 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 RNU6-906P-201ENST00000384700 70 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 POLR2J4-204ENST00000418424 324 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 AC010099.3-201ENST00000423896 409 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.66□□□□□ -2.3
CCL13Q99616 AC013470.1-201ENST00000453438 462 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 RNU7-34P-201ENST00000459394 64 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 AC067942.3-201ENST00000512025 362 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 ACA64.5-201ENST00000516207 127 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 SNORA70.22-201ENST00000517160 124 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 RNU6-165P-201ENST00000517170 99 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 AC022616.3-201ENST00000523940 148 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.66□□□□□ -2.3
CCL13Q99616 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.66□□□□□ -2.3
CCL13Q99616 AC090517.1-201ENST00000569307 266 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.66□□□□□ -2.3
CCL13Q99616 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.66□□□□□ -2.3
CCL13Q99616 AC008088.1-201ENST00000580993 280 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 Z98751.3-201ENST00000604447 521 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 AC008945.2-201ENST00000606056 604 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.66□□□□□ -2.3
CCL13Q99616 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 AC018630.2-201ENST00000534866 2403 ntBASIC0.66□□□□□ -2.3
CCL13Q99616 Y_RNA.238-201ENST00000364441 102 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 RNU6-418P-201ENST00000384035 107 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 MIR122-201ENST00000385044 85 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 RPS29P13-201ENST00000402041 169 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
CCL13Q99616 RPL23AP95-201ENST00000426806 265 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.65□□□□□ -2.31
CCL13Q99616 AC002486.1-201ENST00000435098 391 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.65□□□□□ -2.31
CCL13Q99616 MTATP6P14-201ENST00000455189 673 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 AC016632.1-201ENST00000503994 196 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.65□□□□□ -2.31
CCL13Q99616 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.65□□□□□ -2.31
CCL13Q99616 AC112206.4-201ENST00000515142 405 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.65□□□□□ -2.31
CCL13Q99616 CYP4A27P-201ENST00000567218 190 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 TMF1P1-201ENST00000576058 373 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 MIR4999-201ENST00000585029 91 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 AP000811.1-201ENST00000603803 651 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 AC018714.1-201ENST00000605028 208 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.65□□□□□ -2.31
CCL13Q99616 MIR338-201ENST00000636369 67 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 AL450472.1-202ENST00000637286 180 ntBASIC0.65□□□□□ -2.31
CCL13Q99616 RNU6-545P-201ENST00000362681 104 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 RNU5F-6P-201ENST00000362979 116 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 RNY1P12-201ENST00000364251 105 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 RNU6-1303P-201ENST00000364841 107 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 RNU6-534P-201ENST00000364877 106 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 SNORA72.2-201ENST00000365028 127 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 MIR19B1-201ENST00000384829 87 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CCL13Q99616 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.64□□□□□ -2.31
CCL13Q99616 SNAP23P1-201ENST00000433229 246 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 USP9YP28-201ENST00000435142 589 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.64□□□□□ -2.31
CCL13Q99616 C1DP4-201ENST00000455429 424 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CCL13Q99616 AC091435.1-201ENST00000505442 584 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.64□□□□□ -2.31
CCL13Q99616 RNU6-567P-201ENST00000516746 107 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 PCMTD1P2-201ENST00000565017 355 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 MIR4742-201ENST00000581069 85 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.64□□□□□ -2.31
CCL13Q99616 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.64□□□□□ -2.31
CCL13Q99616 AC138749.5-201ENST00000611461 208 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 AC106800.4-201ENST00000614905 153 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 AC116165.2-201ENST00000616705 206 ntBASIC0.64□□□□□ -2.31
CCL13Q99616 AC138649.3-201ENST00000622154 254 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms