Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
VAT1Q99536 RNY4P34-201ENST00000364779 95 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 SNORA36A-201ENST00000384221 132 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 RNU6-1026P-201ENST00000384465 108 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 RNU6-1065P-201ENST00000384513 106 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 RNU6-584P-201ENST00000410350 95 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 RPL37P10-201ENST00000412884 288 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 MTATP6P19-201ENST00000413797 659 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.97□□□□□ -2.25
VAT1Q99536 MTCO3P29-201ENST00000432119 779 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 AC079781.2-201ENST00000446424 169 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 RNU7-182P-201ENST00000459009 62 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 snoU13.27-201ENST00000459278 104 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 COX6CP14-201ENST00000469580 174 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.97□□□□□ -2.25
VAT1Q99536 RPS23P5-201ENST00000495419 428 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.97□□□□□ -2.25
VAT1Q99536 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.97□□□□□ -2.25
VAT1Q99536 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.97□□□□□ -2.25
VAT1Q99536 AC090517.1-201ENST00000569307 266 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.97□□□□□ -2.25
VAT1Q99536 MIR548AB-201ENST00000584917 84 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 RPL17P51-201ENST00000605218 238 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 AC009994.1-201ENST00000606889 253 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 AL355802.3-201ENST00000607571 545 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.97□□□□□ -2.25
VAT1Q99536 AC008250.2-201ENST00000615261 205 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 AC126177.8-201ENST00000618339 1015 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 AC022418.1-201ENST00000624118 445 ntBASIC0.97□□□□□ -2.25
VAT1Q99536 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VAT1Q99536 RNU1-22P-201ENST00000363334 158 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 Y_RNA.132-201ENST00000363421 102 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 RNU6-827P-201ENST00000365553 106 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 RNU6-877P-201ENST00000383868 107 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 RNU6-393P-201ENST00000384475 107 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 Y_RNA.504-201ENST00000384481 104 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 RNU6-195P-201ENST00000411352 109 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 RPS3AP3-201ENST00000411933 242 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AP000275.1-201ENST00000411943 390 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AC060773.1-201ENST00000421698 310 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AC011233.1-201ENST00000422812 283 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 CST2P1-201ENST00000425770 87 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 HSFY7P-201ENST00000432672 318 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.96□□□□□ -2.26
VAT1Q99536 GPR143P-201ENST00000434155 205 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AC002486.1-201ENST00000435098 391 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 HSFY8P-201ENST00000437934 318 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AL603825.1-201ENST00000438481 80 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AC073910.1-201ENST00000445047 438 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 PRPS1P1-201ENST00000445305 876 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AL031274.1-201ENST00000450334 232 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 HSFY5P-201ENST00000453726 309 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 SNORD11.1-201ENST00000459482 85 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AC079382.1-201ENST00000493346 557 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AC008628.2-201ENST00000502605 298 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AK3P2-201ENST00000507976 429 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 SNORD27.1-201ENST00000516319 72 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 RNU6-856P-201ENST00000516959 98 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 SNORA25.17-201ENST00000517184 124 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AP003072.2-201ENST00000527756 676 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AL512310.8-201ENST00000550183 120 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AC080078.3-201ENST00000605407 463 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AL365434.2-201ENST00000607979 234 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 AC005520.5-201ENST00000613926 164 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VAT1Q99536 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
VAT1Q99536 AC008147.4-201ENST00000617570 1204 ntBASIC0.96□□□□□ -2.26
VAT1Q99536 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
VAT1Q99536 RNU6-418P-201ENST00000384035 107 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 RNU6-1029P-201ENST00000384109 107 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 Y_RNA.480-201ENST00000384364 102 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.95□□□□□ -2.26
VAT1Q99536 SNX2P2-201ENST00000424553 323 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 ISCA1P6-201ENST00000427740 390 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.95□□□□□ -2.26
VAT1Q99536 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.95□□□□□ -2.26
VAT1Q99536 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.95□□□□□ -2.26
VAT1Q99536 RPS27P1-201ENST00000450552 247 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.95□□□□□ -2.26
VAT1Q99536 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.95□□□□□ -2.26
VAT1Q99536 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.95□□□□□ -2.26
VAT1Q99536 LRRC34P2-201ENST00000514850 553 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 RNU2-69P-201ENST00000516061 100 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 RNA5SP384-201ENST00000516615 116 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 RNU6-567P-201ENST00000516746 107 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 RNA5SP503-201ENST00000517047 117 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.95□□□□□ -2.26
VAT1Q99536 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.95□□□□□ -2.26
VAT1Q99536 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.95□□□□□ -2.26
VAT1Q99536 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.95□□□□□ -2.26
VAT1Q99536 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.95□□□□□ -2.26
VAT1Q99536 MZT1P2-201ENST00000604387 248 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 AP001836.1-201ENST00000604675 523 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.95□□□□□ -2.26
VAT1Q99536 AC004223.4-201ENST00000612426 332 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 SNORA43.4-201ENST00000629559 138 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 SEPT14P19-203ENST00000633205 211 ntBASIC0.95□□□□□ -2.26
VAT1Q99536 MTND4P4-201ENST00000439033 1366 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms