Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RNU6-24P-201ENST00000384440 107 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 SNORD105-201ENST00000386910 85 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 AC002381.1-201ENST00000447049 280 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.57□□□□□ -2.5
SPENQ96T58 AC093303.1-201ENST00000514549 295 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.57□□□□□ -2.5
SPENQ96T58 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.57□□□□□ -2.5
SPENQ96T58 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 MTND2P21-201ENST00000436242 1042 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.58□□□□□ -2.5
SPENQ96T58 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 AC023632.1-201ENST00000518463 375 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.58□□□□□ -2.5
SPENQ96T58 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.58□□□□□ -2.5
SPENQ96T58 SNORD115-2-201ENST00000362842 82 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 RNU6-23P-201ENST00000363283 107 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 COX6CP10-201ENST00000416832 224 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.58□□□□□ -2.5
SPENQ96T58 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-0.58□□□□□ -2.5
SPENQ96T58 AC098831.1-201ENST00000440661 216 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.58□□□□□ -2.5
SPENQ96T58 MIR4504-201ENST00000577413 92 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 AF129408.1-201ENST00000608767 431 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 MTND5P16-201ENST00000460269 1703 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.58□□□□□ -2.5
SPENQ96T58 USP9YP22-201ENST00000438971 294 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.58□□□□□ -2.5
SPENQ96T58 MTND1P3-201ENST00000484956 952 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.58□□□□□ -2.5
SPENQ96T58 AC091152.3-201ENST00000604227 325 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 AL159972.1-201ENST00000625150 448 ntBASIC-0.58□□□□□ -2.5
SPENQ96T58 ENSAP3-201ENST00000312710 333 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 RNU6-994P-201ENST00000410507 111 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 AL008629.1-201ENST00000438615 184 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.59□□□□□ -2.5
SPENQ96T58 AC022483.1-201ENST00000514020 567 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 AC117525.1-201ENST00000515228 503 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-0.59□□□□□ -2.5
SPENQ96T58 AC090772.4-201ENST00000623599 362 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 CBX3P9-201ENST00000402326 552 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
SPENQ96T58 AL133396.1-201ENST00000432048 687 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 AC092685.1-201ENST00000447960 1243 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 RNA5SP291-201ENST00000517222 105 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 AK6P2-201ENST00000549020 471 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 PRRC2CP1-201ENST00000404428 159 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
SPENQ96T58 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.59□□□□□ -2.5
SPENQ96T58 UBE2Q2P6-201ENST00000612666 153 ntBASIC-0.59□□□□□ -2.5
SPENQ96T58 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.6□□□□□ -2.5
SPENQ96T58 MTND1P14-201ENST00000427400 950 ntBASIC-0.6□□□□□ -2.5
SPENQ96T58 RNU6-922P-201ENST00000516753 99 ntBASIC-0.6□□□□□ -2.5
SPENQ96T58 RNA5SP437-201ENST00000517249 129 ntBASIC-0.6□□□□□ -2.5
SPENQ96T58 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.6□□□□□ -2.5
SPENQ96T58 MIR3612-201ENST00000579753 87 ntBASIC-0.6□□□□□ -2.5
SPENQ96T58 AL353997.4-201ENST00000586196 166 ntBASIC-0.6□□□□□ -2.5
SPENQ96T58 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.6□□□□□ -2.51
SPENQ96T58 RNA5SP323-201ENST00000391094 133 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 AL133475.1-201ENST00000404414 305 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 RNU4-46P-201ENST00000410818 138 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 RPL31P53-201ENST00000457065 348 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 SNORD54-201ENST00000459159 67 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 RNU6-287P-201ENST00000516230 98 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 RNA5SP470-201ENST00000516463 106 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 RNU6-881P-201ENST00000516813 102 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 AC009032.1-201ENST00000617574 431 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 SNORA8.2-201ENST00000384372 139 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 MIR1185-1-201ENST00000408598 86 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 SNORA40.8-201ENST00000411034 126 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.6□□□□□ -2.51
SPENQ96T58 HLA-S-202ENST00000425174 53 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.6□□□□□ -2.51
SPENQ96T58 AC005042.3-201ENST00000453230 174 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 RBBP4P6-201ENST00000508098 202 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 SNORA25.11-201ENST00000515935 105 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.6□□□□□ -2.51
SPENQ96T58 AC122134.1-202ENST00000569111 1201 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.6□□□□□ -2.51
SPENQ96T58 MTND2P5-201ENST00000432656 1006 ntBASIC-0.61□□□□□ -2.51
SPENQ96T58 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.61□□□□□ -2.51
SPENQ96T58 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.61□□□□□ -2.51
SPENQ96T58 AC113398.2-201ENST00000507630 558 ntBASIC-0.61□□□□□ -2.51
SPENQ96T58 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.61□□□□□ -2.51
SPENQ96T58 MIR101-2-201ENST00000362195 79 ntBASIC-0.61□□□□□ -2.51
SPENQ96T58 SNORD114-25-201ENST00000363742 72 ntBASIC-0.61□□□□□ -2.51
SPENQ96T58 AC027644.1-201ENST00000419595 298 ntBASIC-0.61□□□□□ -2.51
SPENQ96T58 AC109445.1-201ENST00000512356 383 ntBASIC-0.61□□□□□ -2.51
SPENQ96T58 AC008494.2-201ENST00000514544 370 ntBASIC-0.61□□□□□ -2.51
SPENQ96T58 RNU4-49P-201ENST00000516080 140 ntBASIC-0.61□□□□□ -2.51
SPENQ96T58 AC242628.1-201ENST00000606810 391 ntBASIC-0.61□□□□□ -2.51
SPENQ96T58 uc_338.19-201ENST00000616808 99 ntBASIC-0.61□□□□□ -2.51
SPENQ96T58 AC009318.4-201ENST00000620496 486 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms