Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNA5SP98-201ENST00000363158 137 ntBASIC-0.03□□□□□ -2.41
IFT140Q96RY7 RNU4-27P-201ENST00000410889 139 ntBASIC-0.03□□□□□ -2.41
IFT140Q96RY7 AL158050.1-201ENST00000416077 457 ntBASIC-0.03□□□□□ -2.41
IFT140Q96RY7 MTND5P2-201ENST00000442927 1142 ntBASIC-0.03□□□□□ -2.41
IFT140Q96RY7 NFU1P2-201ENST00000448700 469 ntBASIC-0.03□□□□□ -2.41
IFT140Q96RY7 MIR4293-201ENST00000584305 78 ntBASIC-0.03□□□□□ -2.41
IFT140Q96RY7 AC108676.2-201ENST00000605225 163 ntBASIC-0.03□□□□□ -2.41
IFT140Q96RY7 7SK.10-201ENST00000621414 298 ntBASIC-0.03□□□□□ -2.41
IFT140Q96RY7 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
IFT140Q96RY7 RNU6-395P-201ENST00000365662 106 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 SNORD116-13-201ENST00000384408 92 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 FCF1P10-201ENST00000407590 479 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 RPL37P21-201ENST00000435890 276 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 AL049830.1-201ENST00000468034 425 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.04□□□□□ -2.42
IFT140Q96RY7 AC011195.1-201ENST00000578177 177 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 MIR4742-201ENST00000581069 85 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 AC018889.1-201ENST00000605372 397 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 LARP7P1-201ENST00000605576 316 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 AC106754.2-201ENST00000623006 233 ntBASIC-0.04□□□□□ -2.42
IFT140Q96RY7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
IFT140Q96RY7 RNU4-15P-201ENST00000362613 141 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 SNORD95.1-201ENST00000364099 68 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 RNU6-534P-201ENST00000364877 106 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 RNU4-45P-201ENST00000365469 141 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
IFT140Q96RY7 RNU6-163P-201ENST00000384396 106 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 MIR19A-201ENST00000384878 82 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 MIR1305-201ENST00000408300 86 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 RPL22P18-201ENST00000417197 377 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 MTND4P20-201ENST00000424125 869 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 AC006026.2-201ENST00000457376 180 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 RNU6-914P-201ENST00000516749 109 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 MTND2P7-201ENST00000521337 640 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.05□□□□□ -2.42
IFT140Q96RY7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.05□□□□□ -2.42
IFT140Q96RY7 AL356157.2-201ENST00000605122 111 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 AC100810.6-201ENST00000638068 285 ntBASIC-0.05□□□□□ -2.42
IFT140Q96RY7 SNORD44.1-201ENST00000363202 61 ntBASIC-0.06□□□□□ -2.42
IFT140Q96RY7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.06□□□□□ -2.42
IFT140Q96RY7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.06□□□□□ -2.42
IFT140Q96RY7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.06□□□□□ -2.42
IFT140Q96RY7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.06□□□□□ -2.42
IFT140Q96RY7 RPL18AP17-201ENST00000455326 198 ntBASIC-0.06□□□□□ -2.42
IFT140Q96RY7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
IFT140Q96RY7 SUMO2P5-201ENST00000506790 245 ntBASIC-0.06□□□□□ -2.42
IFT140Q96RY7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
IFT140Q96RY7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.06□□□□□ -2.42
IFT140Q96RY7 AL136520.1-202ENST00000555494 763 ntBASIC-0.06□□□□□ -2.42
IFT140Q96RY7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.06□□□□□ -2.42
IFT140Q96RY7 AL929325.1-201ENST00000603096 117 ntBASIC-0.06□□□□□ -2.42
IFT140Q96RY7 RPL21P136-201ENST00000605378 396 ntBASIC-0.06□□□□□ -2.42
IFT140Q96RY7 SNORD114-31-201ENST00000363219 75 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 RNU6-278P-201ENST00000390945 109 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 SNORA75.2-201ENST00000391138 150 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 SNORA75.3-201ENST00000391231 150 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 AC244098.3-201ENST00000424803 96 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 AL627311.1-201ENST00000431514 115 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 AC002486.1-201ENST00000435098 391 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 SNORA43.2-201ENST00000516652 128 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.07□□□□□ -2.42
IFT140Q96RY7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.07□□□□□ -2.42
IFT140Q96RY7 AC080078.2-201ENST00000603766 501 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 RAC1P9-201ENST00000604990 392 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 AC022893.3-201ENST00000607665 437 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.07□□□□□ -2.42
IFT140Q96RY7 MTND5P42-201ENST00000637720 498 ntBASIC-0.07□□□□□ -2.42
IFT140Q96RY7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
IFT140Q96RY7 SNORA75B-201ENST00000384053 137 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 MIR604-201ENST00000384880 94 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.08□□□□□ -2.42
IFT140Q96RY7 DEFB130D-201ENST00000426866 237 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 AC114878.1-201ENST00000441166 358 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 RPL39P39-201ENST00000455840 151 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 AL139824.2-201ENST00000458731 1095 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 AC010531.2-201ENST00000465012 153 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
IFT140Q96RY7 AC027338.1-201ENST00000514840 825 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.08□□□□□ -2.42
IFT140Q96RY7 TPRKBP2-201ENST00000565969 475 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 AC109446.1-201ENST00000566172 220 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 AC004987.4-201ENST00000603383 338 ntBASIC-0.08□□□□□ -2.42
IFT140Q96RY7 MIR16-2-201ENST00000362117 81 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 RNU5B-1-201ENST00000363286 116 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 SNORA72.2-201ENST00000365028 127 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 RNU6-505P-201ENST00000384427 107 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 MIR10A-201ENST00000385043 110 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.09□□□□□ -2.42
IFT140Q96RY7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.09□□□□□ -2.42
IFT140Q96RY7 RNU7-14P-201ENST00000459331 62 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 AP000797.1-201ENST00000478870 387 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 MTND3P5-201ENST00000512798 333 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 RNU6-150P-201ENST00000516237 95 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 AC016256.1-201ENST00000547971 354 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 EIF1P4-201ENST00000572664 335 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 226.8 ms