Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC244670.1-201ENST00000436879 112 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 HMGN2P34-201ENST00000437647 269 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 HSFY8P-201ENST00000437934 318 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AC233266.1-201ENST00000454518 96 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 RPS29P1-201ENST00000465274 159 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AL049830.1-201ENST00000468034 425 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AP000797.1-201ENST00000478870 387 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 HMGB1P29-201ENST00000505659 499 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 RNU6-123P-201ENST00000516163 102 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AP001542.1-201ENST00000591314 200 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AC078795.3-201ENST00000602913 472 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AC097478.2-201ENST00000610572 514 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AC242852.1-201ENST00000612151 96 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AC006386.1-201ENST00000619436 415 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 AC244015.1-201ENST00000622301 99 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.17□□□□□ -2.38
AP1S3Q96PC3 U3.9-201ENST00000363823 204 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 Y_RNA.287-201ENST00000364853 94 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 RNU2-3P-201ENST00000410144 191 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 RNU4-22P-201ENST00000411058 166 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 AC000111.3-201ENST00000433478 193 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 AC016717.1-201ENST00000448918 286 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 AL162395.1-201ENST00000457882 422 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 MTND3P25-201ENST00000509243 135 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 DEFB131C-201ENST00000528817 165 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 AC013828.2-201ENST00000532487 235 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.16□□□□□ -2.38
AP1S3Q96PC3 AC073539.2-201ENST00000597113 165 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 Z83818.1-201ENST00000603584 150 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 AC022217.4-201ENST00000604389 163 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 AC092354.1-201ENST00000606057 376 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.16□□□□□ -2.38
AP1S3Q96PC3 AL359547.2-201ENST00000615810 418 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 FRG1KP-201ENST00000623592 341 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 AL356596.1-201ENST00000624230 379 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.16□□□□□ -2.38
AP1S3Q96PC3 U6.108-201ENST00000637764 58 ntBASIC0.16□□□□□ -2.38
AP1S3Q96PC3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
AP1S3Q96PC3 Y_RNA.132-201ENST00000363421 102 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 SNORD32A-201ENST00000364805 84 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.15□□□□□ -2.39
AP1S3Q96PC3 MIR653-201ENST00000385279 96 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 RNU2-62P-201ENST00000410868 191 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 RNU6-293P-201ENST00000411259 106 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.15□□□□□ -2.39
AP1S3Q96PC3 MTND5P2-201ENST00000442927 1142 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 AK3P2-201ENST00000507976 429 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.15□□□□□ -2.39
AP1S3Q96PC3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.15□□□□□ -2.39
AP1S3Q96PC3 MIR5000-201ENST00000577717 103 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 MIR151B-201ENST00000584249 96 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 AC008507.2-201ENST00000588402 1176 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 AC144521.1-201ENST00000607148 956 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 AC012409.4-201ENST00000612923 249 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 AL512427.1-201ENST00000618593 349 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 MIR6788-201ENST00000618842 66 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.15□□□□□ -2.39
AP1S3Q96PC3 AC100810.6-201ENST00000638068 285 ntBASIC0.15□□□□□ -2.39
AP1S3Q96PC3 MIRLET7D-201ENST00000362263 87 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 snoU2-30.2-201ENST00000362805 70 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 Y_RNA.472-201ENST00000384322 102 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 RNU6-950P-201ENST00000384651 107 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 RNU6-417P-201ENST00000384712 107 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 RPL22P18-201ENST00000417197 377 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.14□□□□□ -2.39
AP1S3Q96PC3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.14□□□□□ -2.39
AP1S3Q96PC3 AC244098.3-201ENST00000424803 96 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 FABP5P4-201ENST00000437203 171 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 AL133217.1-201ENST00000450980 425 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 RNU7-90P-201ENST00000459216 62 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 RBBP4P6-201ENST00000508098 202 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 RNU6-1069P-201ENST00000516612 133 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 EIF4A1P12-201ENST00000551910 141 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 MIR3923-201ENST00000579521 83 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 AC017083.3-201ENST00000609955 700 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 AL360219.1-201ENST00000610230 366 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 AL445523.1-201ENST00000451184 1362 ntBASIC0.14□□□□□ -2.39
AP1S3Q96PC3 RNU6-1141P-201ENST00000364520 107 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 SNORD114-22-201ENST00000365423 72 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 RNU6-723P-201ENST00000383973 107 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 SNORA36A-201ENST00000384221 132 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 RNU6-16P-201ENST00000384385 107 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 SNORD116-13-201ENST00000384408 92 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.13□□□□□ -2.39
AP1S3Q96PC3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.13□□□□□ -2.39
AP1S3Q96PC3 USP9YP28-201ENST00000435142 589 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.13□□□□□ -2.39
AP1S3Q96PC3 AL606662.1-201ENST00000445763 553 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.13□□□□□ -2.39
AP1S3Q96PC3 RPS23P5-201ENST00000495419 428 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.13□□□□□ -2.39
AP1S3Q96PC3 RNU6-496P-201ENST00000516145 99 ntBASIC0.13□□□□□ -2.39
AP1S3Q96PC3 RNU6-917P-201ENST00000516294 104 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms