Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 MIR335-201ENST00000362173 94 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 RNU6-200P-201ENST00000364743 107 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 RNU6-338P-201ENST00000383888 105 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 SNORD116-20-201ENST00000384529 92 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 MIR32-201ENST00000384965 70 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 RNU2-20P-201ENST00000410425 191 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 SUMO1P3-201ENST00000439961 304 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 AL031659.1-201ENST00000447075 539 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 AC091826.1-201ENST00000514065 313 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 RNU6-138P-201ENST00000515952 107 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 AC023824.2-201ENST00000566185 400 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 ZNF861P-201ENST00000588126 639 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 MIR7112-201ENST00000616126 65 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 AC024581.2-201ENST00000619986 252 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDLIM2Q96JY6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 RNU6-1301P-201ENST00000362724 104 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 Y_RNA.54-201ENST00000362766 105 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 SNORD56.1-201ENST00000362913 68 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 RNU6-1286P-201ENST00000383871 107 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 RNU6-17P-201ENST00000384245 107 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 RNU6-843P-201ENST00000384454 104 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 RNU6-18P-201ENST00000384527 107 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 SNORD78.2-201ENST00000391076 69 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 AL079342.1-201ENST00000401460 267 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 RNU4-47P-201ENST00000410876 114 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 EIF1AXP1-201ENST00000419267 435 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 AL139109.1-201ENST00000455491 297 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 RPL30P1-201ENST00000488676 339 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 AC091874.1-201ENST00000511402 339 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 SNORA31.6-201ENST00000516241 130 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 RNU6-1012P-201ENST00000516606 109 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 RNU6-56P-201ENST00000516986 93 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 MIR5680-201ENST00000577577 84 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 MIR3690-201ENST00000580266 75 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 MIR4659A-201ENST00000580269 81 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 AL365434.2-201ENST00000607979 234 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 AC011476.5-201ENST00000615594 130 ntBASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM2Q96JY6 AC096644.4-201ENST00000563417 2912 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 Y_RNA.16-201ENST00000362421 102 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 RNU6-858P-201ENST00000362436 107 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 RNU1-100P-201ENST00000365255 165 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 Y_RNA.539-201ENST00000384635 107 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 UBA52P6-201ENST00000399822 382 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 AL603910.2-201ENST00000407268 136 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 Y_RNA.602-201ENST00000410535 92 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 AC006028.1-201ENST00000438379 402 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 AC016700.2-201ENST00000446011 156 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 RPL21P104-201ENST00000464143 478 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 RMST_6.1-201ENST00000611980 203 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 MIR6134-201ENST00000617606 109 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 AL450472.1-202ENST00000637286 180 ntBASIC3.03□□□□□ -1.92
PDLIM2Q96JY6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 Y_RNA.65-201ENST00000362846 100 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 SNORD81.1-201ENST00000363064 77 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 Y_RNA.117-201ENST00000363294 101 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 SNORA38.1-201ENST00000364172 131 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 RNU6-879P-201ENST00000364328 108 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 RNU1-140P-201ENST00000365040 165 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 Y_RNA.352-201ENST00000365439 102 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 RNU6-926P-201ENST00000384075 107 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 RNU6-937P-201ENST00000384325 106 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 MIR153-2-201ENST00000385225 87 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 MIR888-201ENST00000401186 77 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 MRPL35P1-201ENST00000404272 572 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 YPEL5P1-201ENST00000419731 367 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 AC112220.1-201ENST00000434628 355 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 MTND2P29-201ENST00000438595 412 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 AC087477.1-201ENST00000465747 340 ntBASIC3.02□□□□□ -1.93
PDLIM2Q96JY6 SNRPGP7-201ENST00000469016 106 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms