Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC136Q96JN2 U3.9-201ENST00000363823 204 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 Y_RNA.473-201ENST00000384333 102 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC136Q96JN2 RNA5SP494-201ENST00000410653 129 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 RPL21P111-201ENST00000418453 477 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 AL139396.1-201ENST00000421137 167 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC136Q96JN2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC136Q96JN2 AL353705.4-201ENST00000449661 238 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 PRELID3BP1-201ENST00000457142 540 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC136Q96JN2 ANXA2P1-201ENST00000505539 926 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC136Q96JN2 ACA59.1-201ENST00000515966 143 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 RNU6-991P-201ENST00000516168 107 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 SNORD53-201ENST00000579969 78 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 MIR1291-201ENST00000627649 87 ntBASIC2.96□□□□□ -1.94
CCDC136Q96JN2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC136Q96JN2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC136Q96JN2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC136Q96JN2 SNORD115-3-201ENST00000363100 82 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 MIR549A-201ENST00000385268 96 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 RNU6-1093P-201ENST00000391194 107 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC136Q96JN2 RPS15AP28-201ENST00000435088 386 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 PMCHL2-203ENST00000457791 237 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC136Q96JN2 PRDX4P1-201ENST00000507189 574 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 AC016256.1-201ENST00000547971 354 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC136Q96JN2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC136Q96JN2 AL109918.3-201ENST00000603072 338 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 AL022345.1-201ENST00000607292 135 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 AC009318.2-201ENST00000610917 651 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 MIR6852-201ENST00000621699 66 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 DUXAP9-208ENST00000622815 614 ntBASIC2.95□□□□□ -1.94
CCDC136Q96JN2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC136Q96JN2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC136Q96JN2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC136Q96JN2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCDC136Q96JN2 RNU6-845P-201ENST00000362578 103 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 RNU6-611P-201ENST00000384276 104 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 MIR487A-201ENST00000385009 80 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 MIR1262-201ENST00000408276 93 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 MIR548K-201ENST00000408406 116 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 RNA5SP338-201ENST00000410495 85 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 PDCL2P1-201ENST00000419302 352 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC136Q96JN2 USP9YP30-201ENST00000430729 455 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 RPS3AP52-201ENST00000435639 297 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 RNU1-54P-201ENST00000517181 120 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC136Q96JN2 EIF4A1P12-201ENST00000551910 141 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC136Q96JN2 MIR3162-201ENST00000581818 82 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 AC009994.1-201ENST00000606889 253 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 AL162373.1-201ENST00000620433 407 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC136Q96JN2 AC099654.14-201ENST00000638599 341 ntBASIC2.94□□□□□ -1.94
CCDC136Q96JN2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC136Q96JN2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC136Q96JN2 AP006437.1-201ENST00000641440 3685 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC136Q96JN2 RNU6-301P-201ENST00000384277 107 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 MIR17-201ENST00000385012 84 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 RNU2-41P-201ENST00000410991 178 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC136Q96JN2 AL513124.1-201ENST00000450410 614 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 AL137159.1-201ENST00000452808 512 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 AC087477.1-201ENST00000465747 340 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC136Q96JN2 AC090517.1-201ENST00000569307 266 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC136Q96JN2 AC005520.5-201ENST00000613926 164 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 SDR42E1P4-201ENST00000620894 481 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 AC016717.2-201ENST00000609089 5141 ntBASIC2.93□□□□□ -1.94
CCDC136Q96JN2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CCDC136Q96JN2 RNU6-234P-201ENST00000365229 104 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 RNU6-26P-201ENST00000383985 107 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 U3.40-201ENST00000408706 208 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 Z82188.1-201ENST00000436709 154 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 AC103851.1-201ENST00000506833 274 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 AC116337.1-201ENST00000509680 687 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC136Q96JN2 AC046134.1-201ENST00000514454 666 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC136Q96JN2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC136Q96JN2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC136Q96JN2 AC005668.1-201ENST00000571142 476 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 SNRPGP17-201ENST00000603780 214 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 AP000654.2-201ENST00000605633 586 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 AC091932.3-201ENST00000624223 323 ntBASIC2.92□□□□□ -1.94
CCDC136Q96JN2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC136Q96JN2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CCDC136Q96JN2 AL136360.1-201ENST00000503377 1900 ntBASIC2.91□□□□□ -1.94
CCDC136Q96JN2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms