Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 HMGN1P13-201ENST00000505795 138 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 AC079140.3-201ENST00000511111 550 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 AC091133.4-201ENST00000511142 308 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 RNA5SP401-201ENST00000515920 127 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 RNU6-970P-201ENST00000516312 107 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 RNU6-323P-201ENST00000521915 107 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 CENPUP1-201ENST00000526649 1202 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 DEFB122-202ENST00000569013 197 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.15-201ENST00000611544 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.16-201ENST00000613119 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.12-201ENST00000613778 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.20-201ENST00000613956 192 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 AC083806.3-201ENST00000614016 455 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.9-201ENST00000615427 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.11-201ENST00000616345 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.2-201ENST00000616535 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.3-201ENST00000617785 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.19-201ENST00000618602 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 RNU2-1-201ENST00000618664 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.6-201ENST00000619225 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.5-201ENST00000619465 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 U2.10-201ENST00000620268 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 MTND4P23-201ENST00000447723 1363 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 Y_RNA.359-201ENST00000365498 102 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 RPS20P15-201ENST00000412792 311 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 MTCO1P44-201ENST00000441935 243 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.84□□□□□ -2.11
VMP1Q96GC9 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 RPL9P9-202ENST00000466501 579 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 AC096745.1-201ENST00000509945 370 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 AC025465.3-201ENST00000510570 311 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 AC025465.4-201ENST00000513422 638 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 MTND2P38-201ENST00000522536 667 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.84□□□□□ -2.11
VMP1Q96GC9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.84□□□□□ -2.11
VMP1Q96GC9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.84□□□□□ -2.11
VMP1Q96GC9 AL158827.2-201ENST00000602494 330 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 AC092747.3-201ENST00000603769 301 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 AC009509.4-201ENST00000619202 509 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 AC139792.3-201ENST00000623525 224 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 AL691447.3-201ENST00000635020 330 ntBASIC1.84□□□□□ -2.11
VMP1Q96GC9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.84□□□□□ -2.12
VMP1Q96GC9 RNU6-338P-201ENST00000383888 105 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 U8.21-201ENST00000459536 136 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 AC114801.2-201ENST00000503825 781 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 RNU6-1038P-201ENST00000516516 104 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 RNU6-1069P-201ENST00000516612 133 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 AP005597.4-201ENST00000526762 229 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 HMGB1P33-201ENST00000563485 527 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 RN7SKP299-201ENST00000606679 301 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 AL357078.3-201ENST00000607528 618 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 AC064836.2-201ENST00000609491 462 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VMP1Q96GC9 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.83□□□□□ -2.12
VMP1Q96GC9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
VMP1Q96GC9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.82□□□□□ -2.12
VMP1Q96GC9 RNU6-562P-201ENST00000362731 107 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 RNU6-414P-201ENST00000363705 104 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 RNU4-66P-201ENST00000365199 138 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.82□□□□□ -2.12
VMP1Q96GC9 EBAG9P1-201ENST00000418955 543 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 USP9YP28-201ENST00000435142 589 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 MTCO2P16-201ENST00000436962 677 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 ATP5J2P3-201ENST00000451550 258 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 snoU13.9-201ENST00000458927 103 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 SNORD60.2-201ENST00000516883 86 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.82□□□□□ -2.12
VMP1Q96GC9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.82□□□□□ -2.12
VMP1Q96GC9 AC025423.5-201ENST00000550230 219 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.82□□□□□ -2.12
VMP1Q96GC9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.82□□□□□ -2.12
VMP1Q96GC9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.82□□□□□ -2.12
VMP1Q96GC9 AP001330.5-201ENST00000607176 411 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.82□□□□□ -2.12
VMP1Q96GC9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VMP1Q96GC9 SNORA18.2-201ENST00000383865 132 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 RNU6-38P-201ENST00000384085 107 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 RNU6-1042P-201ENST00000384204 107 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 RNU6-296P-201ENST00000384608 107 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 MTCO1P21-201ENST00000416634 589 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.81□□□□□ -2.12
VMP1Q96GC9 MTND3P9-201ENST00000429526 346 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 snoU13.6-201ENST00000458785 104 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 RNU6-261P-201ENST00000459506 102 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 RPS29P27-201ENST00000463711 170 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 AC010531.2-201ENST00000465012 153 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.81□□□□□ -2.12
VMP1Q96GC9 AC104383.1-201ENST00000530297 370 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 AP005136.1-201ENST00000579765 429 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 AC010928.2-201ENST00000588017 287 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 AC010620.1-201ENST00000601088 1102 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 AC009318.2-201ENST00000610917 651 ntBASIC1.81□□□□□ -2.12
VMP1Q96GC9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.8□□□□□ -2.12
VMP1Q96GC9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.8□□□□□ -2.12
VMP1Q96GC9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
VMP1Q96GC9 RNU6-1322P-201ENST00000364309 107 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms