Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SNORD32A-201ENST00000364805 84 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 Y_RNA.405-201ENST00000383979 100 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 Y_RNA.451-201ENST00000384200 100 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 Y_RNA.524-201ENST00000384564 100 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 Y_RNA.561-201ENST00000384694 100 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 AC074117.2-201ENST00000417130 397 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.56□□□□□ -2
RTP4Q96DX8 U8.22-201ENST00000459141 133 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 AP001025.1-201ENST00000486139 332 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 RPL30P10-201ENST00000488148 337 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
RTP4Q96DX8 MTND4LP22-201ENST00000508209 276 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 RNU6-635P-201ENST00000516651 102 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 SNORA31.23-201ENST00000517219 133 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 AC023442.1-201ENST00000531247 422 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 AC010186.2-204ENST00000537668 439 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
RTP4Q96DX8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.56□□□□□ -2
RTP4Q96DX8 VN1R107P-201ENST00000601784 209 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 AC124312.5-201ENST00000604451 268 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 AC009541.1-201ENST00000438279 2662 ntBASIC2.56□□□□□ -2
RTP4Q96DX8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
RTP4Q96DX8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RTP4Q96DX8 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTP4Q96DX8 Y_RNA.26-201ENST00000362539 101 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 Y_RNA.193-201ENST00000363979 102 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 RNU6-1027P-201ENST00000383998 107 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 MIR27B-201ENST00000385129 97 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 SNORA12.2-201ENST00000391040 156 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 RNU6-101P-201ENST00000410323 104 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 RNU6-1140P-201ENST00000410517 106 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
RTP4Q96DX8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.55□□□□□ -2
RTP4Q96DX8 AL591043.1-201ENST00000432461 424 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.55□□□□□ -2
RTP4Q96DX8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.55□□□□□ -2
RTP4Q96DX8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.55□□□□□ -2
RTP4Q96DX8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.55□□□□□ -2
RTP4Q96DX8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.55□□□□□ -2
RTP4Q96DX8 ADAM3A-203ENST00000461344 2157 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 RNA5SP148-201ENST00000516527 94 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 AC040926.1-201ENST00000530195 238 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 AL590705.4-201ENST00000532209 134 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 CR383656.8-201ENST00000549046 145 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 AC091544.4-201ENST00000555268 342 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.55□□□□□ -2
RTP4Q96DX8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.55□□□□□ -2
RTP4Q96DX8 SNORA43.4-201ENST00000629559 138 ntBASIC2.55□□□□□ -2
RTP4Q96DX8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RTP4Q96DX8 AC103988.1-201ENST00000566382 2177 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 AP000560.1-201ENST00000624150 1937 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 AC016717.2-201ENST00000609089 5141 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 RNU1-105P-201ENST00000363470 161 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 SNORD14.1-201ENST00000365609 90 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 Y_RNA.424-201ENST00000384063 103 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 MIR625-201ENST00000385047 85 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 RNU6-700P-201ENST00000391043 107 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 BTF3L4P2-201ENST00000392798 346 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RTP4Q96DX8 RNU2-49P-201ENST00000410666 184 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.54□□□□□ -2
RTP4Q96DX8 AL358453.1-201ENST00000422522 250 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.54□□□□□ -2
RTP4Q96DX8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.54□□□□□ -2
RTP4Q96DX8 TOMM22P6-201ENST00000465035 409 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 SNRPGP7-201ENST00000469016 106 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 RPS27P26-201ENST00000494583 239 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 MRPS35P2-201ENST00000508242 191 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 SNORA40.14-201ENST00000516543 86 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 AC131281.1-201ENST00000522984 164 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 AC004832.5-201ENST00000608677 401 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 AC110079.1-202ENST00000635213 138 ntBASIC2.54□□□□□ -2
RTP4Q96DX8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RTP4Q96DX8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
RTP4Q96DX8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.54□□□□□ -2
RTP4Q96DX8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
RTP4Q96DX8 Y_RNA.210-201ENST00000364161 110 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 RNA5SP139-201ENST00000364340 117 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 RNU6-806P-201ENST00000365147 105 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.53□□□□□ -2
RTP4Q96DX8 SNORA36A-201ENST00000384221 132 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 Y_RNA.574-201ENST00000384766 95 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 MIR518C-201ENST00000384822 101 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 MIR544A-201ENST00000384855 91 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 MIR487A-201ENST00000385009 80 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 RNA5SP354-201ENST00000391247 136 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 SAR1AP2-201ENST00000392696 594 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 AL133475.1-201ENST00000404414 305 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 Y_RNA.592-201ENST00000410274 109 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 AC009414.1-201ENST00000427200 443 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.53□□□□□ -2
RTP4Q96DX8 RPS15AP5-201ENST00000436276 388 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 MED28P2-201ENST00000475771 317 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 RPL23AP75-201ENST00000491601 451 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 AF186996.7-201ENST00000492781 209 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 RAC1P5-201ENST00000512182 576 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 RNU7-4P-201ENST00000516961 62 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 ACA59.2-201ENST00000517061 156 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms