Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 AC074117.2-201ENST00000417130 397 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 AL139132.1-201ENST00000431587 344 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 AL135938.1-201ENST00000443141 297 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 RPL39P40-201ENST00000445481 146 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 RPS27AP9-201ENST00000477681 438 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 AC091874.1-201ENST00000511402 339 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 RNU7-4P-201ENST00000516961 62 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 MRPS36P4-201ENST00000534436 298 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 AC124312.5-201ENST00000604451 268 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 MIR3199-2-201ENST00000636243 86 ntBASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ATRIPQ8WXE1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 SNORD56.1-201ENST00000362913 68 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 Y_RNA.149-201ENST00000363558 117 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 RNU6-784P-201ENST00000384330 106 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 Y_RNA.512-201ENST00000384518 102 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AP000275.1-201ENST00000411943 390 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AC063976.3-201ENST00000426849 329 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AL591043.1-201ENST00000432461 424 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AL445687.1-201ENST00000439946 251 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AC007969.2-201ENST00000441891 191 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AL031659.1-201ENST00000447075 539 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 UBL5P3-201ENST00000475112 231 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 ACA59.2-201ENST00000517061 156 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 SNORA31.23-201ENST00000517219 133 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AC091544.4-201ENST00000555268 342 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AC009163.5-201ENST00000575421 637 ntBASIC3.1□□□□□ -1.91
ATRIPQ8WXE1 AC009541.1-201ENST00000438279 2662 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AC062016.1-201ENST00000355719 319 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 SNORD14.1-201ENST00000365609 90 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 RNU6-700P-201ENST00000391043 107 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 BTF3L4P2-201ENST00000392798 346 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 RNU2-49P-201ENST00000410666 184 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AC007098.1-201ENST00000420122 367 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 Z82188.1-201ENST00000436709 154 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AL161651.1-201ENST00000440882 223 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AC003982.1-202ENST00000469928 248 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 MED28P2-201ENST00000475771 317 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AP001025.1-201ENST00000486139 332 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 MRPS35P2-201ENST00000508242 191 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 SCGB1D5P-201ENST00000515134 247 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 RN7SKP132-201ENST00000516001 208 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 Y_RNA.721-201ENST00000517207 102 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AC040926.1-201ENST00000530195 238 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AL590705.4-201ENST00000532209 134 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 MIR3671-201ENST00000580455 88 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 MIR3117-201ENST00000584034 78 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 MIR3616-201ENST00000584070 92 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 MIR3149-201ENST00000584629 83 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AC060766.3-201ENST00000591442 263 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AL121655.1-201ENST00000605811 308 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AL359198.2-201ENST00000611836 194 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 AC010205.1-201ENST00000616668 449 ntBASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATRIPQ8WXE1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
ATRIPQ8WXE1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 VTRNA1-1-201ENST00000363120 99 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 Y_RNA.210-201ENST00000364161 110 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 Y_RNA.405-201ENST00000383979 100 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 Y_RNA.451-201ENST00000384200 100 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 Y_RNA.524-201ENST00000384564 100 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 Y_RNA.561-201ENST00000384694 100 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 Y_RNA.574-201ENST00000384766 95 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 AL109933.2-201ENST00000452651 260 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 AC107626.1-201ENST00000471084 183 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 RPL30P10-201ENST00000488148 337 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 SNORA40.14-201ENST00000516543 86 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 AC131281.1-201ENST00000522984 164 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 AC091152.3-201ENST00000604227 325 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 AC090115.4-201ENST00000609970 188 ntBASIC3.08□□□□□ -1.92
ATRIPQ8WXE1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ATRIPQ8WXE1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATRIPQ8WXE1 Y_RNA.176-201ENST00000363815 109 ntBASIC3.07□□□□□ -1.92
ATRIPQ8WXE1 Y_RNA.193-201ENST00000363979 102 ntBASIC3.07□□□□□ -1.92
ATRIPQ8WXE1 RNU6-708P-201ENST00000384217 107 ntBASIC3.07□□□□□ -1.92
ATRIPQ8WXE1 RNU6-843P-201ENST00000384454 104 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms