Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 AC006026.2-201ENST00000457376 180 ntBASIC3.19□□□□□ -1.9
SSH3Q8TE77 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.19□□□□□ -1.9
SSH3Q8TE77 SNORA25.11-201ENST00000515935 105 ntBASIC3.19□□□□□ -1.9
SSH3Q8TE77 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
SSH3Q8TE77 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.19□□□□□ -1.9
SSH3Q8TE77 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.19□□□□□ -1.9
SSH3Q8TE77 AC060766.3-201ENST00000591442 263 ntBASIC3.19□□□□□ -1.9
SSH3Q8TE77 AL390123.1-201ENST00000603216 237 ntBASIC3.19□□□□□ -1.9
SSH3Q8TE77 MTND4LP5-201ENST00000605152 292 ntBASIC3.19□□□□□ -1.9
SSH3Q8TE77 AC062037.2-201ENST00000610137 73 ntBASIC3.19□□□□□ -1.9
SSH3Q8TE77 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SSH3Q8TE77 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SSH3Q8TE77 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSH3Q8TE77 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SSH3Q8TE77 RNU6-884P-201ENST00000363889 107 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 Y_RNA.214-201ENST00000364201 112 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 Y_RNA.307-201ENST00000365022 117 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 RNA5SP210-201ENST00000391034 120 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 SNORA12.2-201ENST00000391040 156 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 BTF3L4P2-201ENST00000392798 346 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 RNA5SP344-201ENST00000411081 104 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.18□□□□□ -1.9
SSH3Q8TE77 RPL23AP49-201ENST00000492925 468 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.18□□□□□ -1.9
SSH3Q8TE77 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 AC034114.1-201ENST00000520293 285 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.18□□□□□ -1.9
SSH3Q8TE77 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.18□□□□□ -1.9
SSH3Q8TE77 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.18□□□□□ -1.9
SSH3Q8TE77 AC104581.2-201ENST00000572227 430 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 MIR4672-201ENST00000583126 81 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 MIR4506-201ENST00000584693 77 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 AC125232.2-201ENST00000592457 143 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 MIR6134-201ENST00000617606 109 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 AC097372.5-201ENST00000623665 376 ntBASIC3.18□□□□□ -1.9
SSH3Q8TE77 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SSH3Q8TE77 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.18□□□□□ -1.9
SSH3Q8TE77 AC026241.1-201ENST00000517873 2142 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 AP000560.1-201ENST00000624150 1937 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 Y_RNA.26-201ENST00000362539 101 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 RNA5SP68-201ENST00000363885 119 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 Y_RNA.461-201ENST00000384263 103 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 MIR592-201ENST00000384959 97 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.17□□□□□ -1.9
SSH3Q8TE77 MIR190B-201ENST00000401119 79 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.17□□□□□ -1.9
SSH3Q8TE77 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.17□□□□□ -1.9
SSH3Q8TE77 AC124916.1-201ENST00000444020 547 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 AL513124.1-201ENST00000450410 614 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.17□□□□□ -1.9
SSH3Q8TE77 AC104564.1-201ENST00000493028 407 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.17□□□□□ -1.9
SSH3Q8TE77 RNY3P15-201ENST00000516297 97 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.17□□□□□ -1.9
SSH3Q8TE77 NACAP3-201ENST00000552100 481 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
SSH3Q8TE77 HMGN2P15-201ENST00000585707 270 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 RPS29P30-201ENST00000600975 111 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 AC019159.1-201ENST00000605094 187 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 AC243829.7-201ENST00000633081 225 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 AC241585.2-209ENST00000638217 143 ntBASIC3.17□□□□□ -1.9
SSH3Q8TE77 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SSH3Q8TE77 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSH3Q8TE77 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSH3Q8TE77 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSH3Q8TE77 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SSH3Q8TE77 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSH3Q8TE77 RNU6-527P-201ENST00000363425 104 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 Y_RNA.222-201ENST00000364264 102 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 RNU6-806P-201ENST00000365147 105 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 Y_RNA.405-201ENST00000383979 100 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 Y_RNA.451-201ENST00000384200 100 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 RNU6-708P-201ENST00000384217 107 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 Y_RNA.471-201ENST00000384312 102 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 Y_RNA.524-201ENST00000384564 100 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 Y_RNA.561-201ENST00000384694 100 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 MIR27B-201ENST00000385129 97 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSH3Q8TE77 RNU6-847P-201ENST00000411115 108 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 NDUFS5P4-201ENST00000412983 318 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.16□□□□□ -1.9
SSH3Q8TE77 AL358453.1-201ENST00000422522 250 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 AC009414.1-201ENST00000427200 443 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 USP9YP16-201ENST00000430287 407 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSH3Q8TE77 USP9YP23-201ENST00000455085 407 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 RPL31P41-201ENST00000477967 372 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 RPS27AP10-201ENST00000496103 208 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.16□□□□□ -1.9
SSH3Q8TE77 RNU6-408P-201ENST00000515910 100 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 RNU6-397P-201ENST00000516226 104 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 RNU2-53P-201ENST00000516257 147 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 RNA5SP320-201ENST00000516263 124 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 RNU6-56P-201ENST00000516986 93 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 AC023157.2-201ENST00000540596 141 ntBASIC3.16□□□□□ -1.9
SSH3Q8TE77 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.16□□□□□ -1.9
SSH3Q8TE77 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.16□□□□□ -1.9
SSH3Q8TE77 AC078899.3-201ENST00000599065 212 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms