Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AP000870.1-201ENST00000472927 406 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 RNU5F-2P-201ENST00000516066 82 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 AP002404.1-201ENST00000532005 451 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 AC079598.5-201ENST00000547460 117 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 AC110079.1-202ENST00000635213 138 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 RNU6-1159P-201ENST00000362933 107 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 RNA5SP387-201ENST00000364226 106 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 MIR1302-3-201ENST00000408128 138 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 AC138623.1-201ENST00000418060 216 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 AIMP1P2-201ENST00000425294 312 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 AL358075.3-201ENST00000426289 226 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 USP9YP16-201ENST00000430287 407 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 USP9YP23-201ENST00000455085 407 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 snoU13.22-201ENST00000459428 104 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 AC010469.2-201ENST00000496412 480 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 HMGB1P35-201ENST00000503360 598 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 RNU6-1114P-201ENST00000516022 107 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 RNU6-567P-201ENST00000516746 107 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 SNORA70.24-201ENST00000517233 118 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 AC004817.2-201ENST00000561794 651 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 UBL5P2-201ENST00000583788 219 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 MIR3149-201ENST00000584629 83 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 RAC1P9-201ENST00000604990 392 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 U4.1-201ENST00000620349 87 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 MIR3651-201ENST00000630427 90 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 SNORD98-201ENST00000636377 67 ntBASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
CCHCR1Q8TD31 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 RNU6-1301P-201ENST00000362724 104 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 Y_RNA.214-201ENST00000364201 112 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 SNORD56.5-201ENST00000364281 72 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 Y_RNA.319-201ENST00000365138 92 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 Y_RNA.333-201ENST00000365274 102 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 snoU13.6-201ENST00000458785 104 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 SNORA25.11-201ENST00000515935 105 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 SNORA31.6-201ENST00000516241 130 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 RNU6-1198P-201ENST00000516904 67 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 RNU6-58P-201ENST00000517143 103 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AC090517.1-201ENST00000569307 266 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AL121655.1-201ENST00000605811 308 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AC005520.5-201ENST00000613926 164 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AC002064.3-201ENST00000623448 346 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 AC000403.1-201ENST00000613696 3585 ntBASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCHCR1Q8TD31 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AC073325.2-201ENST00000339545 159 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 RNU6-212P-201ENST00000362642 104 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 Y_RNA.193-201ENST00000363979 102 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 Y_RNA.458-201ENST00000384240 102 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 RNU6-611P-201ENST00000384276 104 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 Y_RNA.471-201ENST00000384312 102 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 RNU6-159P-201ENST00000391080 106 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 U3.26-201ENST00000391236 204 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AL590004.2-201ENST00000404787 371 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AL451074.5-201ENST00000415894 435 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 ELOCP20-201ENST00000422460 345 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 SDAD1P3-201ENST00000427380 333 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 RPEP5-201ENST00000441137 268 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AC067942.3-201ENST00000512025 362 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 RN7SKP57-201ENST00000517248 293 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 HSPE1P20-201ENST00000538133 289 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AL161670.1-201ENST00000554348 137 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 CYP4A27P-201ENST00000567218 190 ntBASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CCHCR1Q8TD31 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms