Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC015726.2-201ENST00000620112 122 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 AL121890.5-201ENST00000620848 304 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 AC025521.1-201ENST00000621624 286 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 AC099654.7-201ENST00000635788 2127 ntBASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
NEDD1Q8NHV4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 AL136164.4-201ENST00000625013 2135 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 RNU6-1285P-201ENST00000363480 105 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 RNU6-324P-201ENST00000363957 106 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 RNU6-728P-201ENST00000365375 104 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 Z98749.2-208ENST00000381646 500 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 MLLT10P1-201ENST00000418346 262 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 AC098614.2-201ENST00000426040 255 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 FTH1P6-201ENST00000430768 320 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 AL356535.1-201ENST00000440335 398 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 RPS20P22-201ENST00000473700 357 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 AC006199.1-201ENST00000548728 219 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 AC008739.3-201ENST00000603262 127 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 RNA5SP108-201ENST00000605921 117 ntBASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD1Q8NHV4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 SNORD9-201ENST00000362566 104 ntBASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 U3.37-201ENST00000408528 213 ntBASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 SNORD105B-201ENST00000458770 79 ntBASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 RNA5SP54-201ENST00000516951 92 ntBASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 RNA5SP290-201ENST00000517133 127 ntBASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 CYCSP39-201ENST00000565821 309 ntBASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 AC024581.2-201ENST00000619986 252 ntBASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 MFSD8-236ENST00000641509 4050 ntBASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD1Q8NHV4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 AC138915.1-201ENST00000565427 1685 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 RNU6-799P-201ENST00000363567 107 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 RNU6-793P-201ENST00000384233 104 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 MIR1250-201ENST00000408098 113 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 U6atac.2-201ENST00000408644 118 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 NDUFB1P1-201ENST00000435191 180 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 AC007969.2-201ENST00000441891 191 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 GPM6BP3-201ENST00000442797 145 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 HMGN2P32-201ENST00000444648 269 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 SNORD108-201ENST00000459332 71 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 RPS26P45-201ENST00000471748 340 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 RN7SKP209-201ENST00000516888 304 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 MIR3922-201ENST00000585192 84 ntBASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NEDD1Q8NHV4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 RNU1-140P-201ENST00000365040 165 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 MIR488-201ENST00000365739 83 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 RNA5SP475-201ENST00000410568 110 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 AC093578.1-201ENST00000415219 368 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 CYCSP4-201ENST00000429682 331 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 HMGN2P31-201ENST00000432430 273 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 AC009237.8-201ENST00000445492 379 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 SNRPGP5-201ENST00000456003 220 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 Y_RNA.649-201ENST00000459077 103 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 AC090142.3-201ENST00000519012 385 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 AC107016.1-201ENST00000550463 337 ntBASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD1Q8NHV4 MIR5688-201ENST00000580619 83 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms