Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP43Q8NFH3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
NUP43Q8NFH3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUP43Q8NFH3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUP43Q8NFH3 SNORA71.3-201ENST00000362582 128 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 Y_RNA.40-201ENST00000362645 93 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 SNORD116-18-201ENST00000383961 92 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 SNORA18.3-201ENST00000384122 132 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 MIR7-3-201ENST00000384898 110 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 AL357075.1-201ENST00000404107 726 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 AL133475.1-201ENST00000404414 305 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 RNA5SP201-201ENST00000410316 124 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 SNORA57.3-201ENST00000411095 141 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 AL714022.1-201ENST00000439897 151 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 Y_RNA.637-201ENST00000459424 114 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 SCARNA13-201ENST00000516672 275 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 MIR3923-201ENST00000579521 83 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 SNRPGP20-201ENST00000604477 205 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 AL162713.1-201ENST00000604480 262 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 AL034555.1-201ENST00000604816 211 ntBASIC3.42□□□□□ -1.86
NUP43Q8NFH3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.42□□□□□ -1.86
NUP43Q8NFH3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUP43Q8NFH3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.41□□□□□ -1.86
NUP43Q8NFH3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
NUP43Q8NFH3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NUP43Q8NFH3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.41□□□□□ -1.86
NUP43Q8NFH3 RNU6-529P-201ENST00000363383 104 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 RNU6-454P-201ENST00000364292 107 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 Y_RNA.329-201ENST00000365209 107 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 Y_RNA.415-201ENST00000384012 112 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 RNU6-748P-201ENST00000384648 107 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 AL591034.1-201ENST00000407447 340 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NUP43Q8NFH3 AC146944.2-203ENST00000502493 354 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 AC139495.1-202ENST00000513164 354 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 SNORD19.2-201ENST00000516978 73 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 AL137843.1-201ENST00000605078 385 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 MTND1P7-201ENST00000632801 297 ntBASIC3.41□□□□□ -1.86
NUP43Q8NFH3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUP43Q8NFH3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.41□□□□□ -1.86
NUP43Q8NFH3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NUP43Q8NFH3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NUP43Q8NFH3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NUP43Q8NFH3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NUP43Q8NFH3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NUP43Q8NFH3 Y_RNA.7-201ENST00000362352 102 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 SNORA63.1-201ENST00000362493 131 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 Y_RNA.238-201ENST00000364441 102 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 RNU6-1264P-201ENST00000383891 107 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 Y_RNA.412-201ENST00000384001 104 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 RNU6-1081P-201ENST00000384537 107 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 MIR483-201ENST00000385070 76 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 RNU6-1248P-201ENST00000391096 64 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 MIR320B2-201ENST00000408479 138 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 RNA5SP475-201ENST00000410568 110 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 AC004866.1-201ENST00000411748 78 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.4□□□□□ -1.87
NUP43Q8NFH3 AC006989.1-201ENST00000427212 131 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 AC107626.1-201ENST00000471084 183 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 AC140059.1-201ENST00000489238 361 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.4□□□□□ -1.87
NUP43Q8NFH3 RNU6-436P-201ENST00000516171 114 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.4□□□□□ -1.87
NUP43Q8NFH3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.4□□□□□ -1.87
NUP43Q8NFH3 AC105137.2-201ENST00000569073 466 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.4□□□□□ -1.87
NUP43Q8NFH3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 RPS15AP11-201ENST00000594193 385 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 AC069200.1-201ENST00000609511 323 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 PCGEM1.1-201ENST00000613431 131 ntBASIC3.4□□□□□ -1.87
NUP43Q8NFH3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.4□□□□□ -1.87
NUP43Q8NFH3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NUP43Q8NFH3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 RNU6-283P-201ENST00000364788 107 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 RNU4-17P-201ENST00000365598 141 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 RNU6-19P-201ENST00000384718 107 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 RNU2-2P-201ENST00000410396 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 AL133547.1-201ENST00000448546 220 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 snoU13.14-201ENST00000459372 104 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 RNU2-4P-201ENST00000606190 192 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 RNU6-91P-201ENST00000607774 107 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 U2.15-201ENST00000611544 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 U2.16-201ENST00000613119 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 U2.12-201ENST00000613778 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 U2.9-201ENST00000615427 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 U2.11-201ENST00000616345 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 U2.2-201ENST00000616535 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 U2.3-201ENST00000617785 191 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms