Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RPS27P26-201ENST00000494583 239 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 SEPT14P8-201ENST00000508026 178 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 SCARNA20.6-201ENST00000517251 106 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC022080.3-201ENST00000544433 482 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC079598.5-201ENST00000547460 117 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 FAM35CP-201ENST00000554755 2470 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 MTND5P35-201ENST00000557537 1720 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC233702.2-202ENST00000562547 291 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AL109809.4-201ENST00000603520 2185 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC009779.6-201ENST00000603972 165 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 uc_338.14-201ENST00000613162 166 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 PCGEM1.1-201ENST00000613431 131 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 U2.14-201ENST00000615943 113 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 Y_RNA.54-201ENST00000362766 105 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 RNA5SP197-201ENST00000363357 119 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 RNU5F-3P-201ENST00000363767 117 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 RNU6-1210P-201ENST00000363775 107 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 Y_RNA.179-201ENST00000363844 90 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 Y_RNA.230-201ENST00000364348 109 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 Y_RNA.277-201ENST00000364754 102 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 RNU1-57P-201ENST00000384491 166 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 U8.11-201ENST00000384699 133 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 U8.12-201ENST00000384701 133 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 SNORD105B-201ENST00000458770 79 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 U8.18-201ENST00000459285 133 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 AC092185.1-201ENST00000491371 97 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 RNU6-138P-201ENST00000515952 107 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 RNU7-110P-201ENST00000516891 62 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 AC106785.1-201ENST00000565935 262 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 AC055872.1-201ENST00000570978 278 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 MIR4643-201ENST00000577473 78 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 AL162713.1-201ENST00000604480 262 ntBASIC3.22□□□□□ -1.89
HIPK4Q8NE63 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.22□□□□□ -1.89
HIPK4Q8NE63 RNU6-655P-201ENST00000362858 107 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 RNU1-105P-201ENST00000363470 161 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 RNY1-201ENST00000364228 113 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 RNU6-200P-201ENST00000364743 107 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 RNU6-793P-201ENST00000384233 104 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 MIR554-201ENST00000384874 96 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 RNU6ATAC-201ENST00000408749 126 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.21□□□□□ -1.9
HIPK4Q8NE63 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.21□□□□□ -1.9
HIPK4Q8NE63 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.21□□□□□ -1.9
HIPK4Q8NE63 AC115115.1-201ENST00000449927 248 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 RPL36AP48-201ENST00000485521 314 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.21□□□□□ -1.9
HIPK4Q8NE63 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.21□□□□□ -1.9
HIPK4Q8NE63 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.21□□□□□ -1.9
HIPK4Q8NE63 BX284668.6-201ENST00000606899 438 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.21□□□□□ -1.9
HIPK4Q8NE63 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIPK4Q8NE63 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 RNU6-1175P-201ENST00000365200 107 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 RPL21P3-201ENST00000395517 478 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 CYCSP19-201ENST00000411715 316 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 ELOCP21-201ENST00000412558 336 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 RPL32P35-201ENST00000415214 394 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 AL353705.1-201ENST00000433468 480 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 RPS3P1-201ENST00000456781 192 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 AC146507.2-201ENST00000460608 476 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 AC108043.1-201ENST00000512696 574 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 AC074133.1-201ENST00000515696 183 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 CYCSP23-201ENST00000519781 313 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 AC018448.1-201ENST00000552843 316 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 MIR7851-201ENST00000610611 160 ntBASIC3.2□□□□□ -1.9
HIPK4Q8NE63 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIPK4Q8NE63 AC099654.7-201ENST00000635788 2127 ntBASIC3.19□□□□□ -1.9
HIPK4Q8NE63 Y_RNA.65-201ENST00000362846 100 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms