Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MTCO2P8-201ENST00000412213 658 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 AL139396.1-201ENST00000421137 167 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 RAC1P6-201ENST00000423911 575 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 ISCA1P1-201ENST00000426679 387 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 MTCO1P19-201ENST00000443487 500 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 RPL7P55-201ENST00000450522 746 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 RPL18AP17-201ENST00000455326 198 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 BNIP3P24-201ENST00000593398 557 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 AC063943.3-201ENST00000615562 356 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 FTX_2.1-201ENST00000618816 94 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 AC019226.1-201ENST00000625666 515 ntBASIC-0.61□□□□□ -2.51
CFAP43Q8NDM7 RNU6-655P-201ENST00000362858 107 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 MIR421-201ENST00000365696 85 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 RNU2-23P-201ENST00000410545 195 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 USP9YP22-201ENST00000438971 294 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 RNU6-922P-201ENST00000516753 99 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 AL596245.1-201ENST00000618994 362 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 RNU4-32P-201ENST00000363404 141 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 RNU6-747P-201ENST00000390928 104 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 SNORA75.2-201ENST00000391138 150 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 RNU6-241P-201ENST00000391148 104 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 SNORA75.3-201ENST00000391231 150 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 SNORA40.8-201ENST00000411034 126 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 MTCO3P45-201ENST00000443036 613 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 STAG3L5P-204ENST00000443759 179 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 MTCO3P10-201ENST00000455912 772 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 AL355297.3-201ENST00000604082 446 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 MIR548AZ-201ENST00000616567 95 ntBASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
CFAP43Q8NDM7 MTND4P21-201ENST00000453886 1357 ntBASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 SNORD115-24-201ENST00000363528 82 ntBASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 RNU6-438P-201ENST00000365561 103 ntBASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 AC013828.1-201ENST00000481845 158 ntBASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 SNORD60.2-201ENST00000516883 86 ntBASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 AC105185.1-201ENST00000518705 535 ntBASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 AC093519.1-201ENST00000566109 298 ntBASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 AC136618.2-201ENST00000575091 400 ntBASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.63□□□□□ -2.51
CFAP43Q8NDM7 SUGT1P1-201ENST00000379514 476 ntBASIC-0.64□□□□□ -2.51
CFAP43Q8NDM7 RNU6-679P-201ENST00000391003 106 ntBASIC-0.64□□□□□ -2.51
CFAP43Q8NDM7 AC027644.1-201ENST00000419595 298 ntBASIC-0.64□□□□□ -2.51
CFAP43Q8NDM7 MTCYBP10-201ENST00000424905 650 ntBASIC-0.64□□□□□ -2.51
CFAP43Q8NDM7 RNU6-138P-201ENST00000515952 107 ntBASIC-0.64□□□□□ -2.51
CFAP43Q8NDM7 SUB1P2-201ENST00000556401 297 ntBASIC-0.64□□□□□ -2.51
CFAP43Q8NDM7 MIR5695-201ENST00000579717 85 ntBASIC-0.64□□□□□ -2.51
CFAP43Q8NDM7 MIR4743-201ENST00000584576 69 ntBASIC-0.64□□□□□ -2.51
CFAP43Q8NDM7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.64□□□□□ -2.51
CFAP43Q8NDM7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 MTATP6P16-201ENST00000434543 526 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 snoU13.14-201ENST00000459372 104 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 AP002001.1-203ENST00000534002 267 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 TPRKBP2-201ENST00000565969 475 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 MIR8076-201ENST00000611401 83 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 AC006157.1-201ENST00000611750 366 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 AC106754.2-201ENST00000623006 233 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 SNORD114-3-201ENST00000364969 75 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 SNORA4.2-201ENST00000365313 147 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 RNU6-929P-201ENST00000384429 107 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 OR9P1P-201ENST00000496431 281 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 RNU6-572P-201ENST00000516724 80 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 AC011979.2-201ENST00000527568 352 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 AC023157.2-201ENST00000540596 141 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 AC090502.2-201ENST00000549267 280 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 AC092447.9-201ENST00000603395 144 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 AC008147.4-201ENST00000617570 1204 ntBASIC-0.65□□□□□ -2.51
CFAP43Q8NDM7 MTCO3P41-201ENST00000414801 328 ntBASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 AP000797.1-201ENST00000478870 387 ntBASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 AC027419.1-201ENST00000522976 328 ntBASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 MTND1P15-201ENST00000579262 949 ntBASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 AC005176.2-201ENST00000596933 147 ntBASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 AC080078.2-201ENST00000603766 501 ntBASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 AC093788.1-201ENST00000609356 927 ntBASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 SEPT14P17-201ENST00000617978 177 ntBASIC-0.66□□□□□ -2.52
CFAP43Q8NDM7 MIR18A-201ENST00000362310 71 ntBASIC-0.67□□□□□ -2.52
CFAP43Q8NDM7 SNORA1.1-201ENST00000364671 133 ntBASIC-0.67□□□□□ -2.52
CFAP43Q8NDM7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
CFAP43Q8NDM7 MIR892B-201ENST00000401279 77 ntBASIC-0.67□□□□□ -2.52
CFAP43Q8NDM7 AL034345.1-201ENST00000407768 123 ntBASIC-0.67□□□□□ -2.52
CFAP43Q8NDM7 SNORD111-201ENST00000408139 94 ntBASIC-0.67□□□□□ -2.52
CFAP43Q8NDM7 SNORD75.1-201ENST00000408373 60 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms