Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AC010615.1-201ENST00000594254 1764 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF169Q8NCN4 SNORA29-201ENST00000384183 140 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 RNU6-1026P-201ENST00000384465 108 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 RNA5SP213-201ENST00000391031 106 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 SNORA26.3-201ENST00000391119 136 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 RNU1-139P-201ENST00000391307 165 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 RN7SKP123-201ENST00000410732 291 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 ARL5AP4-201ENST00000430731 512 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 AL714022.1-201ENST00000439897 151 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF169Q8NCN4 RNU6-581P-201ENST00000516214 105 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF169Q8NCN4 MIR4298-201ENST00000584380 73 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 HMGN2P15-201ENST00000585707 270 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF169Q8NCN4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF169Q8NCN4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF169Q8NCN4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
RNF169Q8NCN4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RNF169Q8NCN4 ADAM3A-203ENST00000461344 2157 ntBASIC3.21□□□□□ -1.9
RNF169Q8NCN4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF169Q8NCN4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF169Q8NCN4 Y_RNA.14-201ENST00000362415 103 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 U8.10-201ENST00000384260 133 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 RNU6-622P-201ENST00000384272 103 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 MIR153-2-201ENST00000385225 87 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 RNU7-87P-201ENST00000459343 62 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 AC087477.1-201ENST00000465747 340 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 RN7SKP132-201ENST00000516001 208 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 Y_RNA.680-201ENST00000516441 93 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 RNU6-1012P-201ENST00000516606 109 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 ACA59.2-201ENST00000517061 156 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF169Q8NCN4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF169Q8NCN4 ELOCP29-201ENST00000588193 334 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 RPL12P50-201ENST00000603116 116 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 AL450472.1-202ENST00000637286 180 ntBASIC3.2□□□□□ -1.9
RNF169Q8NCN4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RNF169Q8NCN4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.2□□□□□ -1.9
RNF169Q8NCN4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.2□□□□□ -1.9
RNF169Q8NCN4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RNF169Q8NCN4 AC008264.2-201ENST00000610193 3731 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 RNU6-858P-201ENST00000362436 107 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 RNU6-1301P-201ENST00000362724 104 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 Y_RNA.257-201ENST00000364596 102 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 RNU6-142P-201ENST00000384019 107 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 RNU1-101P-201ENST00000391171 127 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 RPL21P38-201ENST00000418090 167 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 EIF1P2-201ENST00000428233 350 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 AC105272.1-201ENST00000438604 198 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.19□□□□□ -1.9
RNF169Q8NCN4 MTND1P19-201ENST00000511780 315 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 SNORA31.1-201ENST00000515993 133 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 SNORA31.5-201ENST00000516190 133 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 AC090897.2-201ENST00000581715 130 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 AC005357.1-201ENST00000588399 301 ntBASIC3.19□□□□□ -1.9
RNF169Q8NCN4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF169Q8NCN4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 RNU6-222P-201ENST00000362438 107 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 RNU6-137P-201ENST00000363680 108 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 MIR544A-201ENST00000384855 91 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 SNORD115-46-201ENST00000390982 71 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 SNORD78.2-201ENST00000391076 69 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 RNA5SP390-201ENST00000410191 113 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 RNU2-38P-201ENST00000410856 79 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 AC078809.1-201ENST00000427601 140 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 TRBVB-201ENST00000477100 408 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 AC016632.1-201ENST00000503994 196 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 RNU6-1114P-201ENST00000516022 107 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 SNORD19.2-201ENST00000516978 73 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 RNU6-388P-201ENST00000517012 105 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 RNU6-389P-201ENST00000517048 105 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 RNU6-711P-201ENST00000517255 106 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 AC027288.2-201ENST00000553028 243 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 MIR4319-201ENST00000577285 85 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 AL442067.1-201ENST00000613261 223 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 AC137590.2-201ENST00000619709 240 ntBASIC3.18□□□□□ -1.9
RNF169Q8NCN4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF169Q8NCN4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RNF169Q8NCN4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF169Q8NCN4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF169Q8NCN4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RNF169Q8NCN4 AC092268.1-201ENST00000342691 405 ntBASIC3.17□□□□□ -1.9
RNF169Q8NCN4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.17□□□□□ -1.9
RNF169Q8NCN4 SNORD115-8-201ENST00000363856 82 ntBASIC3.17□□□□□ -1.9
RNF169Q8NCN4 SNORD115-38-201ENST00000365037 82 ntBASIC3.17□□□□□ -1.9
RNF169Q8NCN4 Y_RNA.439-201ENST00000384119 94 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms