Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 Y_RNA.706-201ENST00000516933 99 ntBASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 SUB1P3-201ENST00000564581 315 ntBASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 MIR5701-3-201ENST00000578890 82 ntBASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 MIR5701-1-201ENST00000585138 82 ntBASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 MIR5701-2-201ENST00000615634 82 ntBASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 AC006026.1-201ENST00000444025 1803 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 MIR449A-201ENST00000362113 91 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 RNU1-35P-201ENST00000362782 153 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 U3.9-201ENST00000363823 204 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 RNU6-1274P-201ENST00000384557 107 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 Y_RNA.579-201ENST00000390939 94 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 AL138827.1-201ENST00000402666 306 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 RNA5SP201-201ENST00000410316 124 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 SNORD109B-201ENST00000458961 67 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 SNORD109A-201ENST00000459128 67 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 AC107871.2-201ENST00000612894 502 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 PCGEM1.1-201ENST00000613431 131 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 AC090971.5-201ENST00000621102 293 ntBASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PRPF38AQ8NAV1 AL136360.1-201ENST00000503377 1900 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 RNU6-137P-201ENST00000363680 108 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 RNU1-112P-201ENST00000364401 164 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 RNU1-109P-201ENST00000383960 147 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 Y_RNA.577-201ENST00000384794 101 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 MIR95-201ENST00000385072 81 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 SNORA12.2-201ENST00000391040 156 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 MIR320B2-201ENST00000408479 138 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 RNU2-52P-201ENST00000410680 190 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 CBX3P6-201ENST00000430257 527 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 AC099799.1-201ENST00000439809 192 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 EIF4A1P12-201ENST00000551910 141 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 RPL17P51-201ENST00000605218 238 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF38AQ8NAV1 Z82209.1-201ENST00000422141 2135 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 MIR512-1-201ENST00000384913 84 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 MIR32-201ENST00000384965 70 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 SNORA46.1-201ENST00000391069 153 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 RNU6-1093P-201ENST00000391194 107 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 RNA5SP21-201ENST00000410917 96 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 UBE2V1P7-201ENST00000446395 340 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 AC027575.1-201ENST00000481064 460 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 RNU6-976P-201ENST00000516086 111 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 RNA5SP54-201ENST00000516951 92 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 SNORA48.11-201ENST00000517015 89 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 AC004584.2-201ENST00000570407 410 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 MIR4658-201ENST00000584344 65 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 MIR4298-201ENST00000584380 73 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 AL356575.1-201ENST00000603008 283 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 AL355297.2-201ENST00000604792 129 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 AC090115.4-201ENST00000609970 188 ntBASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF38AQ8NAV1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
PRPF38AQ8NAV1 AC092593.1-201ENST00000515413 1815 ntBASIC3.21□□□□□ -1.89
PRPF38AQ8NAV1 Y_RNA.405-201ENST00000383979 100 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.419-201ENST00000384041 102 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.451-201ENST00000384200 100 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.524-201ENST00000384564 100 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.561-201ENST00000384694 100 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 MIR625-201ENST00000385047 85 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 AL590004.2-201ENST00000404787 371 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 RPL19P1-201ENST00000411635 428 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 snoU13.6-201ENST00000458785 104 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 AC132942.1-201ENST00000486753 483 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 RNU7-4P-201ENST00000516961 62 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 AC010928.2-201ENST00000588017 287 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.21□□□□□ -1.9
PRPF38AQ8NAV1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms