Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC093591.1-201ENST00000491435 481 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 RPL21P16-201ENST00000495531 483 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.36□□□□□ -1.87
SYNE4Q8N205 RNU6-572P-201ENST00000516724 80 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 DEFB108E-201ENST00000524692 240 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.36□□□□□ -1.87
SYNE4Q8N205 AL450472.1-202ENST00000637286 180 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SYNE4Q8N205 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SYNE4Q8N205 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.35□□□□□ -1.87
SYNE4Q8N205 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNE4Q8N205 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.35□□□□□ -1.87
SYNE4Q8N205 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNE4Q8N205 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNE4Q8N205 Y_RNA.117-201ENST00000363294 101 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 Y_RNA.123-201ENST00000363338 102 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 RNU6-270P-201ENST00000364131 105 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 SNORA12.2-201ENST00000391040 156 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 MTCO3P19-201ENST00000415864 321 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.35□□□□□ -1.87
SYNE4Q8N205 RNU6-928P-201ENST00000516876 104 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 AC068657.1-201ENST00000520807 306 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 AC245166.1-201ENST00000521012 253 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 AL590705.4-201ENST00000532209 134 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.35□□□□□ -1.87
SYNE4Q8N205 AC015712.3-201ENST00000559380 164 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 MIR4300-201ENST00000581016 96 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 AC009779.6-201ENST00000603972 165 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 AC025754.2-201ENST00000606491 432 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 AC137590.2-201ENST00000619709 240 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 U2.21-201ENST00000637295 81 ntBASIC3.35□□□□□ -1.87
SYNE4Q8N205 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNE4Q8N205 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNE4Q8N205 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SYNE4Q8N205 ZNF658B-202ENST00000615961 3375 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.34□□□□□ -1.87
SYNE4Q8N205 RNU6-222P-201ENST00000362438 107 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 Y_RNA.27-201ENST00000362540 103 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 RNU6-805P-201ENST00000365643 106 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 RNU6-102P-201ENST00000384485 104 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 MIR764-201ENST00000390811 85 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 RPS4XP3-201ENST00000398541 413 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 MIR190B-201ENST00000401119 79 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 AL603910.2-201ENST00000407268 136 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 PIGPP3-201ENST00000425307 415 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 AC098614.2-201ENST00000426040 255 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.34□□□□□ -1.87
SYNE4Q8N205 snoU13.23-201ENST00000458863 104 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 RNU7-87P-201ENST00000459343 62 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 TOMM22P6-201ENST00000465035 409 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 RPS29P21-201ENST00000496272 170 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.34□□□□□ -1.87
SYNE4Q8N205 AC109329.2-201ENST00000519658 482 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 MRPS36P4-201ENST00000534436 298 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 AL355877.2-201ENST00000603670 358 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 AP000787.2-201ENST00000604432 568 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 HSPE1P7-201ENST00000604681 321 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SYNE4Q8N205 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SYNE4Q8N205 CUL1P1-201ENST00000509510 2425 ntBASIC3.34□□□□□ -1.87
SYNE4Q8N205 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
SYNE4Q8N205 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
SYNE4Q8N205 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
SYNE4Q8N205 AC007256.1-201ENST00000392253 2765 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 RNU6-78P-201ENST00000362897 107 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 Y_RNA.150-201ENST00000363562 102 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 Z98749.2-208ENST00000381646 500 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 Y_RNA.541-201ENST00000384640 113 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 MIR591-201ENST00000385290 95 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 SNORD115-46-201ENST00000390982 71 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 AP000275.1-201ENST00000411943 390 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 AL603825.1-201ENST00000438481 80 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 AP004217.1-201ENST00000480579 346 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 Y_RNA.713-201ENST00000517013 96 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.33□□□□□ -1.88
SYNE4Q8N205 AL442163.3-201ENST00000554110 156 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 MIR4643-201ENST00000577473 78 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.33□□□□□ -1.88
SYNE4Q8N205 AC010928.2-201ENST00000588017 287 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 AC060766.3-201ENST00000591442 263 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 AC098479.1-201ENST00000609225 154 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 AC011476.5-201ENST00000615594 130 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 AC097372.5-201ENST00000623665 376 ntBASIC3.33□□□□□ -1.88
SYNE4Q8N205 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.33□□□□□ -1.88
SYNE4Q8N205 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SYNE4Q8N205 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.32□□□□□ -1.88
SYNE4Q8N205 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.32□□□□□ -1.88
SYNE4Q8N205 RNA5SP289-201ENST00000362332 137 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 RNU6-778P-201ENST00000363269 103 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 Y_RNA.143-201ENST00000363520 106 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 RNU6-1035P-201ENST00000384477 107 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 RPS29P13-201ENST00000402041 169 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 AP000567.1-201ENST00000406413 156 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 AL451074.5-201ENST00000415894 435 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.32□□□□□ -1.88
SYNE4Q8N205 AL078601.1-201ENST00000444542 271 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 PRELID3BP1-201ENST00000457142 540 ntBASIC3.32□□□□□ -1.88
SYNE4Q8N205 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms