Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 Y_RNA.700-201ENST00000516806 100 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 SNORD19.2-201ENST00000516978 73 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 FTX_2.1-201ENST00000618816 94 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 SNORA25.1-201ENST00000362326 128 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.270-201ENST00000364693 104 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-283P-201ENST00000364788 107 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.793-201ENST00000411222 111 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 RPL19P1-201ENST00000411635 428 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AL357552.1-201ENST00000445254 415 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 UQCRBP2-201ENST00000447827 297 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AC007215.1-201ENST00000464893 276 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 RPL23AP67-201ENST00000465341 474 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 SNRPGP3-201ENST00000469405 227 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AC091179.3-201ENST00000474761 144 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AC103975.1-201ENST00000482506 483 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 SNORD116-28-201ENST00000516123 91 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 SNORA70.19-201ENST00000516717 90 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AC018448.1-201ENST00000552843 316 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 MIR3923-201ENST00000579521 83 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AL034555.1-201ENST00000604816 211 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AC037487.3-201ENST00000606668 112 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AC096577.2-201ENST00000611455 153 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 MIR8058-201ENST00000615737 89 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AL138880.2-201ENST00000616214 239 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AC006111.3-201ENST00000622137 383 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AC092628.2-201ENST00000622492 339 ntBASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM48Q8IWZ4 AL049781.1-201ENST00000623195 3585 ntBASIC3.34□□□□□ -1.88
TRIM48Q8IWZ4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
TRIM48Q8IWZ4 AC002546.1-201ENST00000588041 2504 ntBASIC3.34□□□□□ -1.88
TRIM48Q8IWZ4 AC068647.1-201ENST00000489539 2265 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 AL353746.1-201ENST00000566293 6881 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 RNU4-56P-201ENST00000364700 142 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 RNA5SP267-201ENST00000364893 126 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 SNORA72.2-201ENST00000365028 127 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.383-201ENST00000383855 97 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-793P-201ENST00000384233 104 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.498-201ENST00000384460 102 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-750P-201ENST00000390946 107 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 AL512633.1-201ENST00000399931 655 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 AL138752.1-201ENST00000452964 351 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.644-201ENST00000459006 113 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-625P-201ENST00000459412 107 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 AP001324.2-201ENST00000461163 319 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.674-201ENST00000516362 113 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 IGKV2-26-201ENST00000518305 343 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 AC024405.2-202ENST00000532731 184 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 AC026333.2-201ENST00000542164 106 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 MIR3136-201ENST00000583498 78 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 MIR4276-201ENST00000584832 70 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 BX322639.1-202ENST00000423987 2213 ntBASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM48Q8IWZ4 SNORD114-19-201ENST00000363072 75 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.230-201ENST00000364348 109 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.555-201ENST00000384673 110 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 RN7SKP111-201ENST00000410349 271 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 CYCSP48-201ENST00000417124 323 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 POLR2KP2-201ENST00000438155 177 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 AC009237.7-201ENST00000447357 229 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 AL441985.1-201ENST00000457727 251 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 AC112771.1-201ENST00000463581 102 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 AC008155.2-201ENST00000464337 397 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 AC091959.1-201ENST00000495857 238 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 AC107393.1-201ENST00000512403 346 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 MIR5047-201ENST00000579212 100 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 AL512605.2-201ENST00000592972 256 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 AL162424.1-201ENST00000602325 221 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 AC018692.3-201ENST00000623929 123 ntBASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM48Q8IWZ4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 MIR410-201ENST00000362222 80 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 MIR411-201ENST00000362239 96 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.101-201ENST00000363154 102 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.122-201ENST00000363331 96 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.292-201ENST00000364904 97 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-514P-201ENST00000384208 107 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 RNU4-61P-201ENST00000411243 107 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 ELOCP21-201ENST00000412558 336 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms