Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL356776.1-201ENST00000406574 447 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AL445685.2-201ENST00000422551 342 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AL590556.1-201ENST00000423231 483 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 MTND1P2-201ENST00000430604 821 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 USP9YP28-201ENST00000435142 589 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 MTND4LP16-201ENST00000440828 295 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 GPM6BP3-201ENST00000442797 145 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AC007677.1-201ENST00000445757 515 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 HMGN2P23-201ENST00000456759 269 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 HMGB1P35-201ENST00000503360 598 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 RNA5SP182-201ENST00000516064 82 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 RNU4-49P-201ENST00000516080 140 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AC023043.2-201ENST00000589678 1026 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AC011494.1-201ENST00000596454 237 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AC009248.2-201ENST00000619826 254 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 MTND4P1-201ENST00000457501 1466 ntBASIC2.13□□□□□ -2.07
CCDC60Q8IWA6 AP006437.1-201ENST00000641440 3685 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 Y_RNA.151-201ENST00000363566 112 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 SNORA36A-201ENST00000384221 132 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 RNU6-95P-201ENST00000384697 107 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 SNORA40.18-201ENST00000391200 128 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 SNORA26.9-201ENST00000391322 122 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 RPL23AP95-201ENST00000426806 265 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 Z82205.1-201ENST00000428456 297 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 AC108210.2-201ENST00000503681 201 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 AC016632.1-201ENST00000503994 196 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 RNU6-864P-201ENST00000516256 108 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 SNORA48.11-201ENST00000517015 89 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 RN7SKP256-201ENST00000517201 314 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 AC118273.2-201ENST00000532092 465 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 MIR4769-201ENST00000584126 77 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 MIR3976-201ENST00000606807 139 ntBASIC2.12□□□□□ -2.07
CCDC60Q8IWA6 CASC19-280ENST00000642102 1351 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 Y_RNA.123-201ENST00000363338 102 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 RNU6-944P-201ENST00000364023 107 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 RNU6-1013P-201ENST00000384180 107 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 MIR29B2-201ENST00000385055 81 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 MIR95-201ENST00000385072 81 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 RN7SKP61-201ENST00000410642 295 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 EIF1AXP1-201ENST00000419267 435 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AC009238.1-201ENST00000442165 424 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AC009237.6-201ENST00000446969 424 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 RPS29P27-201ENST00000463711 170 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AC130509.1-201ENST00000464158 433 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 MIR3136-201ENST00000583498 78 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AC078795.3-201ENST00000602913 472 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AL356157.2-201ENST00000605122 111 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 U4atac.1-201ENST00000618345 95 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 AP000560.1-201ENST00000624150 1937 ntBASIC2.11□□□□□ -2.07
CCDC60Q8IWA6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AC092268.1-201ENST00000342691 405 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 Y_RNA.135-201ENST00000363439 95 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 RNU4-56P-201ENST00000364700 142 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 RNA5SP138-201ENST00000365098 114 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 SNORD116-11-201ENST00000383882 92 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 MIR9-3-201ENST00000385084 90 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 MIR561-201ENST00000385216 97 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 RNU6-876P-201ENST00000391295 104 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 Y_RNA.597-201ENST00000410463 100 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AC078809.1-201ENST00000427601 140 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AL133396.1-201ENST00000432048 687 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 MTND1P11-201ENST00000456661 876 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AC104564.1-201ENST00000493028 407 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AC145146.1-201ENST00000496370 254 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 RPS29P11-201ENST00000496507 171 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AC114801.2-201ENST00000503825 781 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AC022447.4-201ENST00000504053 364 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 RNU6-965P-201ENST00000516721 96 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms