Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.7□□□□□ -1.98
HERC6Q8IVU3 AP000705.1-201ENST00000454567 350 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 AC116337.1-201ENST00000509680 687 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.7□□□□□ -1.98
HERC6Q8IVU3 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.7□□□□□ -1.98
HERC6Q8IVU3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.7□□□□□ -1.98
HERC6Q8IVU3 AC093027.1-201ENST00000546698 429 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 MIR3670-2-201ENST00000582974 65 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 MIR3670-1-201ENST00000584160 65 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 MIR4795-201ENST00000584182 89 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 MIR3670-3-201ENST00000584855 65 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 MIR3670-4-201ENST00000612260 65 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 AC137590.2-201ENST00000619709 240 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.7□□□□□ -1.98
HERC6Q8IVU3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HERC6Q8IVU3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.69□□□□□ -1.98
HERC6Q8IVU3 RNU6-694P-201ENST00000364071 147 ntBASIC2.69□□□□□ -1.98
HERC6Q8IVU3 RNU6-968P-201ENST00000384076 107 ntBASIC2.69□□□□□ -1.98
HERC6Q8IVU3 MT-TD-201ENST00000387419 68 ntBASIC2.69□□□□□ -1.98
HERC6Q8IVU3 SNORA26.3-201ENST00000391119 136 ntBASIC2.69□□□□□ -1.98
HERC6Q8IVU3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.69□□□□□ -1.98
HERC6Q8IVU3 RPS3AP52-201ENST00000435639 297 ntBASIC2.69□□□□□ -1.98
HERC6Q8IVU3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.69□□□□□ -1.98
HERC6Q8IVU3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.69□□□□□ -1.98
HERC6Q8IVU3 MTND4P17-201ENST00000470444 350 ntBASIC2.69□□□□□ -1.98
HERC6Q8IVU3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.69□□□□□ -1.98
HERC6Q8IVU3 PTP4A1P4-201ENST00000512479 322 ntBASIC2.69□□□□□ -1.98
HERC6Q8IVU3 SNORA48.11-201ENST00000517015 89 ntBASIC2.69□□□□□ -1.98
HERC6Q8IVU3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.69□□□□□ -1.98
HERC6Q8IVU3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.69□□□□□ -1.98
HERC6Q8IVU3 AC022140.2-201ENST00000623500 188 ntBASIC2.69□□□□□ -1.98
HERC6Q8IVU3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HERC6Q8IVU3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.69□□□□□ -1.98
HERC6Q8IVU3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 AC233981.2-201ENST00000611524 1614 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 SNORD114-1-201ENST00000362705 72 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 RNU6-596P-201ENST00000365395 98 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 Y_RNA.482-201ENST00000384377 111 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 AL591034.2-201ENST00000402839 359 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 RNU4-14P-201ENST00000410858 122 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 EIF4EP2-201ENST00000422816 654 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 AC012306.1-201ENST00000423267 114 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 AL353752.1-201ENST00000454946 260 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 AC090096.1-201ENST00000489168 390 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 AC091874.1-201ENST00000511402 339 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 CYP4A27P-201ENST00000567218 190 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 MTND4P29-201ENST00000503122 1372 ntBASIC2.68□□□□□ -1.98
HERC6Q8IVU3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.68□□□□□ -1.98
HERC6Q8IVU3 AC073544.1-201ENST00000600110 1595 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 Y_RNA.58-201ENST00000362807 102 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 Y_RNA.154-201ENST00000363624 102 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 RNA5SP99-201ENST00000364020 114 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 SNORA25.6-201ENST00000364121 118 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 RNY3P1-201ENST00000365085 102 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 RNY3-201ENST00000365484 102 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 RNU6-1286P-201ENST00000383871 107 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 RNU6-1032P-201ENST00000384100 107 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 Y_RNA.490-201ENST00000384413 102 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 RNU6-306P-201ENST00000384617 107 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 RN7SKP158-201ENST00000410453 326 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 CBX3P6-201ENST00000430257 527 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.67□□□□□ -1.98
HERC6Q8IVU3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.67□□□□□ -1.98
HERC6Q8IVU3 RNA5SP281-201ENST00000516504 135 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 RNU6-1016P-201ENST00000516689 94 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 RNU6-548P-201ENST00000517083 115 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 AL355375.2-201ENST00000574825 175 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 PISRT1.1-201ENST00000616930 107 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.67□□□□□ -1.98
HERC6Q8IVU3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HERC6Q8IVU3 AC006026.1-201ENST00000444025 1803 ntBASIC2.67□□□□□ -1.98
HERC6Q8IVU3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HERC6Q8IVU3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 RNU4-79P-201ENST00000362764 141 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 Y_RNA.813-201ENST00000364639 102 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 RNA5SP494-201ENST00000410653 129 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 AC009238.1-201ENST00000442165 424 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 AC096638.1-201ENST00000444678 216 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 AC009237.6-201ENST00000446969 424 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.66□□□□□ -1.98
HERC6Q8IVU3 Y_RNA.635-201ENST00000459041 101 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 AC145146.1-201ENST00000496370 254 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 SNORA31.16-201ENST00000516773 139 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.66□□□□□ -1.98
HERC6Q8IVU3 AC021269.2-201ENST00000532318 330 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.66□□□□□ -1.98
HERC6Q8IVU3 Z98751.3-201ENST00000604447 521 ntBASIC2.66□□□□□ -1.98
HERC6Q8IVU3 HMGB1P24-202ENST00000615653 685 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms