Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MTCO2P3-201ENST00000442543 421 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 AC007547.1-201ENST00000462177 490 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 AC108078.1-201ENST00000508073 725 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 SNORA14.1-201ENST00000516113 141 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 SNORA31.17-201ENST00000516953 127 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 SUB1P4-201ENST00000566062 339 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 AC006362.1-201ENST00000567392 174 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 SNORA26.9-201ENST00000391322 122 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AF228730.1-201ENST00000397972 663 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 MIR208B-201ENST00000401172 77 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AL121890.1-201ENST00000435457 205 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 RNU7-14P-201ENST00000459331 62 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 MTCO3P38-201ENST00000468910 766 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC097473.1-201ENST00000508142 408 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC010486.3-201ENST00000511602 785 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-1038P-201ENST00000516516 104 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 RNU5F-4P-201ENST00000516581 114 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-567P-201ENST00000516746 107 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AL160236.1-201ENST00000556317 195 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 MIR5094-201ENST00000578766 85 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC087683.1-201ENST00000591187 441 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC116312.1-201ENST00000606841 314 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC009509.4-201ENST00000619202 509 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 AC233981.2-201ENST00000611524 1614 ntBASIC1.44□□□□□ -2.18
NUDCD3Q8IVD9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 Y_RNA.77-201ENST00000362962 107 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 RNU4-55P-201ENST00000410731 137 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 CDK8P2-201ENST00000415020 547 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC012306.1-201ENST00000423267 114 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 MTCO3P46-201ENST00000425787 232 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 MTCO2P16-201ENST00000436962 677 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 TPTE2P5-203ENST00000458118 728 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 TPT1P7-201ENST00000458300 517 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC079140.3-201ENST00000511111 550 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC091133.4-201ENST00000511142 308 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 SNORA40.12-201ENST00000516329 111 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC026407.1-201ENST00000518369 204 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AP005597.4-201ENST00000526762 229 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC027807.1-201ENST00000559921 996 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC090517.1-201ENST00000569307 266 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC009994.1-201ENST00000606889 253 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC005520.5-201ENST00000613926 164 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC090582.1-201ENST00000636321 199 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 AC009541.1-201ENST00000438279 2662 ntBASIC1.43□□□□□ -2.18
NUDCD3Q8IVD9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 MTND5P9-201ENST00000503854 1755 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 RNU1-76P-201ENST00000362903 159 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 SNORD31B-201ENST00000364977 69 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-1106P-201ENST00000390845 107 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 RN7SKP51-201ENST00000410781 304 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 SDAD1P3-201ENST00000427380 333 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 HMGB1P18-201ENST00000438801 619 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AC007677.1-201ENST00000445757 515 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AL357134.1-201ENST00000445848 426 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AC112492.4-201ENST00000456549 352 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 RPL31P3-201ENST00000458430 332 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AC005908.1-201ENST00000468701 347 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-189P-201ENST00000516120 101 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-612P-201ENST00000516909 102 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-548P-201ENST00000517083 115 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 CENPUP1-201ENST00000526649 1202 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AL118558.2-201ENST00000556294 238 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AC005858.4-201ENST00000623191 700 ntBASIC1.42□□□□□ -2.18
NUDCD3Q8IVD9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms