Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SNORD50.1-201ENST00000362987 71 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LDB1Q86U70 RNU6-378P-201ENST00000384324 107 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 RNU6-306P-201ENST00000384617 107 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 MIR208B-201ENST00000401172 77 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 EIF4EP2-201ENST00000422816 654 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 FTH1P25-201ENST00000447665 469 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 AL353705.4-201ENST00000449661 238 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 MTND3P10-201ENST00000450967 341 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.22□□□□□ -2.05
LDB1Q86U70 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.22□□□□□ -2.05
LDB1Q86U70 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 EIF4A1P12-201ENST00000551910 141 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 AC109446.1-201ENST00000566172 220 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 AL132822.1-201ENST00000617063 513 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 AC005858.4-201ENST00000623191 700 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 MTND5P6-201ENST00000422338 1798 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LDB1Q86U70 ZNF720P1-201ENST00000562403 1939 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LDB1Q86U70 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
LDB1Q86U70 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
LDB1Q86U70 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LDB1Q86U70 RNU6-1159P-201ENST00000362933 107 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 RNU6-596P-201ENST00000365395 98 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.21□□□□□ -2.06
LDB1Q86U70 Y_RNA.390-201ENST00000383932 102 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 RNU6-26P-201ENST00000383985 107 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 SNORA80E-201ENST00000384744 137 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 MIR548F5-201ENST00000408421 86 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 RNA5SP508-201ENST00000411327 119 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 EDDM3CP-201ENST00000415977 425 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 HMGB1P18-201ENST00000438801 619 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 AC098614.3-201ENST00000438957 440 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 AC107399.1-201ENST00000451226 265 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 AC079354.2-201ENST00000453523 154 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 SNORD5.1-201ENST00000458800 75 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.21□□□□□ -2.06
LDB1Q86U70 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 AP002770.2-201ENST00000543613 532 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.21□□□□□ -2.06
LDB1Q86U70 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.21□□□□□ -2.06
LDB1Q86U70 SNRPGP17-201ENST00000603780 214 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 AC009994.1-201ENST00000606889 253 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 uc_338.5-201ENST00000611839 155 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 AC245884.12-201ENST00000615364 59 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.21□□□□□ -2.06
LDB1Q86U70 SNORA3A-201ENST00000364113 130 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 RNU6-593P-201ENST00000364716 112 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 Y_RNA.339-201ENST00000365325 102 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 MIR524-201ENST00000385242 87 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 RNU6-1093P-201ENST00000391194 107 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.2□□□□□ -2.06
LDB1Q86U70 RPS3AP52-201ENST00000435639 297 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.2□□□□□ -2.06
LDB1Q86U70 snoU13.6-201ENST00000458785 104 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 AC005741.1-201ENST00000511094 432 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 AC026271.5-201ENST00000577873 130 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 AP000654.2-201ENST00000605633 586 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 AC009318.2-201ENST00000610917 651 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 AC137590.2-201ENST00000619709 240 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 MTND5P9-201ENST00000503854 1755 ntBASIC2.2□□□□□ -2.06
LDB1Q86U70 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.19□□□□□ -2.06
LDB1Q86U70 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.19□□□□□ -2.06
LDB1Q86U70 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LDB1Q86U70 RNU4-53P-201ENST00000410828 140 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 RNA5SP270-201ENST00000411361 118 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 RPS26P42-201ENST00000413485 326 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 PDCL2P1-201ENST00000419302 352 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 USP9YP30-201ENST00000430729 455 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 IFNA11P-201ENST00000446352 526 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 RPL23AP75-201ENST00000491601 451 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.19□□□□□ -2.06
LDB1Q86U70 AC103851.1-201ENST00000506833 274 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 RNA5SP137-201ENST00000516833 135 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.19□□□□□ -2.06
LDB1Q86U70 MIR4273-201ENST00000582824 84 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 MIR1248-201ENST00000629190 106 ntBASIC2.19□□□□□ -2.06
LDB1Q86U70 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
LDB1Q86U70 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LDB1Q86U70 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LDB1Q86U70 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LDB1Q86U70 Y_RNA.184-201ENST00000363884 108 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 RNU6-174P-201ENST00000410406 106 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 RPL37P10-201ENST00000412884 288 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 NCOR1P3-201ENST00000420479 303 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.18□□□□□ -2.06
LDB1Q86U70 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.18□□□□□ -2.06
LDB1Q86U70 OR2AQ1P-201ENST00000451972 200 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AL137159.1-201ENST00000452808 512 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.18□□□□□ -2.06
LDB1Q86U70 AC087477.1-201ENST00000465747 340 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AF186996.7-201ENST00000492781 209 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 HMGN1P12-201ENST00000499125 195 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 ANXA2P1-201ENST00000505539 926 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.18□□□□□ -2.06
LDB1Q86U70 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms