Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-336P-201ENST00000364891 107 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 SNORD23.1-201ENST00000408212 104 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AL117339.3-201ENST00000418733 162 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AL591043.1-201ENST00000432461 424 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AC007969.2-201ENST00000441891 191 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AC009238.1-201ENST00000442165 424 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AC009237.6-201ENST00000446969 424 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AP000763.2-201ENST00000540641 163 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AC090897.2-201ENST00000581715 130 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AC064836.2-201ENST00000609491 462 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AL161423.1-201ENST00000613700 262 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
NPHP3Q7Z494 U6atac.1-201ENST00000616025 117 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AC002553.4-201ENST00000616896 331 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AC100810.6-201ENST00000638068 285 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 AC006026.1-201ENST00000444025 1803 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 RNU6-1032P-201ENST00000384100 107 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 MIR7-2-201ENST00000384970 110 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 EIF4E2P1-201ENST00000393781 255 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 RNU6-1148P-201ENST00000410992 104 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 RNU6-293P-201ENST00000411259 106 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AC013470.1-201ENST00000453438 462 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AC079140.5-201ENST00000507882 310 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 RPL39P5-202ENST00000512505 151 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AC104576.1-201ENST00000524225 88 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AC118273.2-201ENST00000532092 465 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 RPL30P11-203ENST00000598995 310 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 FAM157A-202ENST00000615155 405 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AC121333.1-201ENST00000567488 2709 ntBASIC2.25□□□□□ -2.05
NPHP3Q7Z494 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
NPHP3Q7Z494 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NPHP3Q7Z494 RNU6-254P-201ENST00000363377 107 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 SNORA7.1-201ENST00000363750 139 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 Y_RNA.191-201ENST00000363972 113 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 RNU6-487P-201ENST00000365430 104 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 RNU6-692P-201ENST00000384496 107 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 MIR544A-201ENST00000384855 91 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.24□□□□□ -2.05
NPHP3Q7Z494 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.24□□□□□ -2.05
NPHP3Q7Z494 AIMP1P2-201ENST00000425294 312 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 AC243964.1-201ENST00000441814 261 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.24□□□□□ -2.05
NPHP3Q7Z494 RNU1-123P-201ENST00000458950 160 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.24□□□□□ -2.05
NPHP3Q7Z494 AK3P2-201ENST00000507976 429 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.24□□□□□ -2.05
NPHP3Q7Z494 RNU6-1332P-201ENST00000516666 104 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 AC109479.2-201ENST00000517842 174 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.24□□□□□ -2.05
NPHP3Q7Z494 CYCSP26-201ENST00000534107 320 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 MIR4419B-201ENST00000577260 68 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 MIR3126-201ENST00000577443 74 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.24□□□□□ -2.05
NPHP3Q7Z494 AC008121.3-201ENST00000618726 433 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 uc_338.20-201ENST00000621563 178 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 HAUS6P2-201ENST00000433254 2404 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 MTND5P35-201ENST00000557537 1720 ntBASIC2.24□□□□□ -2.05
NPHP3Q7Z494 Y_RNA.248-201ENST00000364501 109 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 MIR450B-201ENST00000401182 78 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 RNA5SP489-201ENST00000410986 109 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 AC008267.5-201ENST00000424928 265 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 MTATP6P13-201ENST00000438531 667 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.23□□□□□ -2.05
NPHP3Q7Z494 RNU7-66P-201ENST00000459469 62 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 AC008628.2-201ENST00000502605 298 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 AC092436.3-201ENST00000511788 257 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 AC087854.1-201ENST00000519706 414 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 COPS8P3-201ENST00000526024 482 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.23□□□□□ -2.05
NPHP3Q7Z494 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.23□□□□□ -2.05
NPHP3Q7Z494 ELOCP5-201ENST00000604924 333 ntBASIC2.23□□□□□ -2.05
NPHP3Q7Z494 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.23□□□□□ -2.05
NPHP3Q7Z494 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NPHP3Q7Z494 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
NPHP3Q7Z494 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NPHP3Q7Z494 RNU6-1010P-201ENST00000362757 107 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 MIR186-201ENST00000384988 86 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NPHP3Q7Z494 RNA5SP390-201ENST00000410191 113 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 RNU6-373P-201ENST00000411247 98 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 RPL39P29-201ENST00000447779 157 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 FGF7P6-202ENST00000451282 293 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.22□□□□□ -2.05
NPHP3Q7Z494 AC007547.1-201ENST00000462177 490 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 SNRPGP7-201ENST00000469016 106 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 RN7SL274P-201ENST00000492268 272 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms