Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RNU6-567P-201ENST00000516746 107 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 Y_RNA.706-201ENST00000516933 99 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.42□□□□□ -2.02
SHFQ7M4L6 COX6CP5-201ENST00000527162 228 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC027176.1-201ENST00000560204 514 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC105245.1-201ENST00000581934 244 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 MIR4635-201ENST00000583759 79 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC092447.9-201ENST00000603395 144 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AL713866.2-201ENST00000603579 219 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 Y_RNA.812-201ENST00000610788 101 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC006157.1-201ENST00000611750 366 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 Y_RNA.784-201ENST00000613803 101 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC005520.5-201ENST00000613926 164 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 Y_RNA.787-201ENST00000616522 101 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 Y_RNA.780-201ENST00000617336 101 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 Y_RNA.801-201ENST00000619005 101 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC138305.3-201ENST00000624988 240 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SHFQ7M4L6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.42□□□□□ -2.02
SHFQ7M4L6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SHFQ7M4L6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.42□□□□□ -2.02
SHFQ7M4L6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.41□□□□□ -2.02
SHFQ7M4L6 AC138915.1-201ENST00000565427 1685 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 RNU4-56P-201ENST00000364700 142 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 RNU4-42P-201ENST00000364738 142 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 RNU1-115P-201ENST00000365329 160 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 SET-203ENST00000372688 801 ntTSL 2 BASIC2.41□□□□□ -2.02
SHFQ7M4L6 RNU1-138P-201ENST00000384093 164 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 MIR625-201ENST00000385047 85 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 RPS26P42-201ENST00000413485 326 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 EEF1A1P41-201ENST00000414667 207 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.41□□□□□ -2.02
SHFQ7M4L6 AL160004.2-201ENST00000432935 350 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 CR769767.1-201ENST00000436337 346 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.41□□□□□ -2.02
SHFQ7M4L6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.41□□□□□ -2.02
SHFQ7M4L6 SCARNA15.1-201ENST00000516384 125 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 RNU4-77P-201ENST00000516692 156 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SHFQ7M4L6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.41□□□□□ -2.02
SHFQ7M4L6 AC027288.2-201ENST00000553028 243 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.41□□□□□ -2.02
SHFQ7M4L6 MIR4446-201ENST00000578505 67 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 MIR3923-201ENST00000579521 83 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 AC090616.3-201ENST00000582184 217 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.41□□□□□ -2.02
SHFQ7M4L6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 MIR8057-201ENST00000620957 69 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.41□□□□□ -2.02
SHFQ7M4L6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SHFQ7M4L6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHFQ7M4L6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.41□□□□□ -2.02
SHFQ7M4L6 MIR6073-201ENST00000352083 89 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 Y_RNA.106-201ENST00000363189 100 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 SNORA33.2-201ENST00000365413 134 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 RNU6-1032P-201ENST00000384100 107 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 SNORA18.3-201ENST00000384122 132 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 RNU6-378P-201ENST00000384324 107 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 MIR153-2-201ENST00000385225 87 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 SNORA48.7-201ENST00000391302 135 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 AC096644.2-201ENST00000429278 159 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.4□□□□□ -2.03
SHFQ7M4L6 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.4□□□□□ -2.03
SHFQ7M4L6 AC145146.1-201ENST00000496370 254 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 AC023141.11-201ENST00000508864 202 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.4□□□□□ -2.03
SHFQ7M4L6 RNA5SP341-201ENST00000516261 117 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 RNU7-4P-201ENST00000516961 62 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 RNU6-988P-201ENST00000519081 107 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 MIR3944-201ENST00000581277 108 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.4□□□□□ -2.03
SHFQ7M4L6 SNORD58B-201ENST00000607313 66 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 AC069294.1-201ENST00000608397 350 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 AC040896.1-201ENST00000613819 479 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 AC083806.3-201ENST00000614016 455 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 AC137590.2-201ENST00000619709 240 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 MIR4272-201ENST00000635924 64 ntBASIC2.4□□□□□ -2.03
SHFQ7M4L6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SHFQ7M4L6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SHFQ7M4L6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SHFQ7M4L6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SHFQ7M4L6 RNU6-222P-201ENST00000362438 107 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 Y_RNA.202-201ENST00000364083 110 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 SNORD56.5-201ENST00000364281 72 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 Y_RNA.364-201ENST00000365532 101 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 SNORA46.1-201ENST00000391069 153 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 MIR208B-201ENST00000401172 77 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.39□□□□□ -2.03
SHFQ7M4L6 RNU7-169P-201ENST00000459456 61 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 AC080013.2-201ENST00000460866 323 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 AC090515.1-201ENST00000465295 476 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SHFQ7M4L6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.39□□□□□ -2.03
SHFQ7M4L6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.39□□□□□ -2.03
SHFQ7M4L6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.39□□□□□ -2.03
SHFQ7M4L6 AC016925.2-201ENST00000605108 242 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms