Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.12□□□□□ -2.07
CDHR3Q6ZTQ4 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
CDHR3Q6ZTQ4 MIR3126-201ENST00000577443 74 ntBASIC2.12□□□□□ -2.07
CDHR3Q6ZTQ4 MIR4648-201ENST00000580107 72 ntBASIC2.12□□□□□ -2.07
CDHR3Q6ZTQ4 MIR5694-201ENST00000581190 76 ntBASIC2.12□□□□□ -2.07
CDHR3Q6ZTQ4 AL670379.2-201ENST00000604983 252 ntBASIC2.12□□□□□ -2.07
CDHR3Q6ZTQ4 AL161423.1-201ENST00000613700 262 ntBASIC2.12□□□□□ -2.07
CDHR3Q6ZTQ4 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.12□□□□□ -2.07
CDHR3Q6ZTQ4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CDHR3Q6ZTQ4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 MIR544A-201ENST00000384855 91 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 MIR517A-201ENST00000385001 87 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 MIR561-201ENST00000385216 97 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AL591034.2-201ENST00000402839 359 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 RNU2-23P-201ENST00000410545 195 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 USP9YP30-201ENST00000430729 455 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AL645568.3-201ENST00000433683 316 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 RNU6-1037P-201ENST00000459571 107 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 SNORA4.4-201ENST00000515921 135 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 RNU6-612P-201ENST00000516909 102 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AC121758.2-201ENST00000553271 193 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 C8orf59P2-201ENST00000603441 271 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AL022345.1-201ENST00000607292 135 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AL133215.3-201ENST00000609801 448 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AC007792.1-201ENST00000623023 402 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AL008636.1-201ENST00000625038 1018 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 AC099654.5-201ENST00000636479 350 ntBASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.11□□□□□ -2.07
CDHR3Q6ZTQ4 RNU4-73P-201ENST00000363164 141 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 RNU1-23P-201ENST00000363361 144 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 SNORD32A-201ENST00000364805 84 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 RNU6-842P-201ENST00000384269 107 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 AC074085.1-201ENST00000413598 418 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 SNRPGP7-201ENST00000469016 106 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 RNU7-193P-201ENST00000516723 65 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 AL355375.2-201ENST00000574825 175 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 AP001836.1-201ENST00000604675 523 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 AC063943.3-201ENST00000615562 356 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 AC012640.5-201ENST00000623897 319 ntBASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDHR3Q6ZTQ4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 U3.13-201ENST00000364804 214 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 Y_RNA.404-201ENST00000383978 102 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 RNU6-43P-201ENST00000384302 107 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 MIR95-201ENST00000385072 81 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 RNU2-41P-201ENST00000410991 178 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 RPS15AP10-201ENST00000432472 382 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 AC093019.1-201ENST00000443135 252 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 RPL39P29-201ENST00000447779 157 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 AL121594.1-201ENST00000475906 575 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 FO393415.2-201ENST00000480085 343 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 MTCO1P29-201ENST00000496868 288 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 FGF7P4-201ENST00000509595 295 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 AC026782.1-201ENST00000512952 449 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 Y_RNA.670-201ENST00000516255 105 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 SNORA48.11-201ENST00000517015 89 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 APOOP3-201ENST00000536787 586 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 AC009127.3-201ENST00000570531 403 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 MIR4795-201ENST00000584182 89 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 BNIP3P16-201ENST00000589779 534 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 AC019193.3-201ENST00000609144 554 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 AC022202.1-201ENST00000613515 211 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 MIR6132-201ENST00000622083 109 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 SNORA43.4-201ENST00000629559 138 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 MTND4LP32-201ENST00000636111 270 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 MIR1302-1-201ENST00000637932 143 ntBASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDHR3Q6ZTQ4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.09□□□□□ -2.08
CDHR3Q6ZTQ4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
CDHR3Q6ZTQ4 Y_RNA.48-201ENST00000362710 103 ntBASIC2.08□□□□□ -2.08
CDHR3Q6ZTQ4 Y_RNA.67-201ENST00000362870 100 ntBASIC2.08□□□□□ -2.08
CDHR3Q6ZTQ4 RNU6-1210P-201ENST00000363775 107 ntBASIC2.08□□□□□ -2.08
CDHR3Q6ZTQ4 SNORA25B-201ENST00000365507 128 ntBASIC2.08□□□□□ -2.08
CDHR3Q6ZTQ4 SNORA36A-201ENST00000384221 132 ntBASIC2.08□□□□□ -2.08
CDHR3Q6ZTQ4 SNORD116-29-201ENST00000384516 83 ntBASIC2.08□□□□□ -2.08
CDHR3Q6ZTQ4 SNORA64-201ENST00000384674 134 ntBASIC2.08□□□□□ -2.08
CDHR3Q6ZTQ4 MIR521-1-201ENST00000384902 87 ntBASIC2.08□□□□□ -2.08
CDHR3Q6ZTQ4 SNORA11.4-201ENST00000408823 129 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms