Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNA5SP504-201ENST00000410676 117 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AL008629.1-201ENST00000438615 184 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 RNU7-34P-201ENST00000459394 64 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC113410.1-201ENST00000505029 247 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 MTCO1P31-201ENST00000506355 492 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC091874.1-201ENST00000511402 339 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 MTCO3P28-201ENST00000513351 515 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 MIR3681-201ENST00000580089 72 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AF038458.1-201ENST00000588406 262 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AL031281.1-201ENST00000604049 488 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AL358072.1-201ENST00000604156 575 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AL121992.2-201ENST00000606262 256 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 U8.7-201ENST00000364940 136 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 RNU6-658P-201ENST00000384606 106 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 RNA5SP222-201ENST00000411039 105 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 MTCO3P29-201ENST00000432119 779 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC092427.1-201ENST00000439177 601 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC104332.1-201ENST00000440471 797 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 snoU13.30-201ENST00000458951 104 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC104982.1-201ENST00000478775 574 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 RNU6-138P-201ENST00000515952 107 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 RNU6-760P-201ENST00000516078 97 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 RNA5SP481-201ENST00000516814 122 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC008147.4-201ENST00000617570 1204 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 AC099654.9-201ENST00000637055 678 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 SGO1P1-201ENST00000603525 1447 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 RNA5SP128-201ENST00000365305 116 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AL590084.2-201ENST00000401481 382 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 RPL39P39-201ENST00000455840 151 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 SNORD111.1-201ENST00000516421 86 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AL353149.1-201ENST00000610667 244 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 RMST_4.1-201ENST00000616886 107 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AL157786.1-207ENST00000627771 695 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 SMIM11P1-201ENST00000369586 178 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 MIR7-1-201ENST00000384871 110 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AC016831.2-201ENST00000417179 352 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AL606662.1-201ENST00000445763 553 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 RAD1P2-201ENST00000446414 663 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 CECR9-201ENST00000453421 199 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AC245047.8-201ENST00000456455 284 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 RPS3AP17-201ENST00000472594 777 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 SNORA25.18-201ENST00000607153 114 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AL159153.1-201ENST00000619688 317 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AC019226.1-201ENST00000625666 515 ntBASIC-0.15□□□□□ -2.43
CSPG4Q6UVK1 AC107982.1-201ENST00000507171 1300 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 RNU6-622P-201ENST00000384272 103 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 SNORA80D-201ENST00000384488 135 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 RNU6-114P-201ENST00000384704 105 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 MT-TQ-201ENST00000387372 72 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 MIR1285-2-201ENST00000408311 88 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 MTCO2P34-201ENST00000421994 607 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 FABP5P4-201ENST00000437203 171 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 AC005094.1-201ENST00000440420 368 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 LINC01399-202ENST00000458450 244 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 AC097473.1-201ENST00000508142 408 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 AC104136.1-201ENST00000512969 394 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 RNU2-46P-201ENST00000517038 113 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 AC011979.2-201ENST00000527568 352 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 MIR8054-201ENST00000620877 86 ntBASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.16□□□□□ -2.43
CSPG4Q6UVK1 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 RNY4P6-201ENST00000363667 96 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 SNORD105-201ENST00000386910 85 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 SNORD12-201ENST00000391002 90 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 AC002486.1-201ENST00000435098 391 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms