Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MTCO2P31-201ENST00000402702 684 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 AL136310.1-201ENST00000404926 654 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 USP9YP13-201ENST00000417797 480 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 OR6C5P-201ENST00000452388 923 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 RNU6-152P-201ENST00000384037 107 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 RNA5SP163-201ENST00000410304 99 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 AC006366.1-201ENST00000422002 759 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 RPL39P39-201ENST00000455840 151 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 AC107297.1-201ENST00000459991 176 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 RNU6-922P-201ENST00000516753 99 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 AC018462.2-201ENST00000605375 395 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 AC116165.2-201ENST00000616705 206 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 SNORD115-24-201ENST00000363528 82 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 ARL5AP1-201ENST00000418991 388 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 RPL36P19-201ENST00000430744 301 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 AC002381.1-201ENST00000447049 280 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 AL391001.1-201ENST00000602747 715 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 AC093788.1-201ENST00000609356 927 ntBASIC-0.44□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 SNORA25.7-201ENST00000364375 127 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 RNY1P7-201ENST00000384743 110 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AL133396.1-201ENST00000432048 687 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 USP9YP29-201ENST00000445112 563 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 RNU6-488P-201ENST00000515918 99 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 RNU6-947P-201ENST00000516264 106 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AL670379.3-201ENST00000605040 251 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC009268.2-201ENST00000621925 457 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 MTND4P8-201ENST00000514997 1362 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 RNU6-697P-201ENST00000363348 107 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 SNORD82-201ENST00000365530 70 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 MIR514A1-201ENST00000385133 98 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 SNORD57-201ENST00000448188 72 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AL160314.1-201ENST00000490836 438 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 MRPS36P4-201ENST00000534436 298 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 MIR3169-201ENST00000578032 83 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 RNU6-730P-201ENST00000383954 104 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 ZNF886P-201ENST00000450781 723 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC245047.8-201ENST00000456455 284 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC116655.1-201ENST00000508324 901 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC093259.1-201ENST00000509755 300 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 MTND4LP26-201ENST00000518144 282 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AF235103.2-201ENST00000525753 346 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 MTCO2P15-201ENST00000532655 656 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC122134.1-202ENST00000569111 1201 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC068205.3-201ENST00000636385 468 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 LRRC34P1-201ENST00000542742 915 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AL109620.1-201ENST00000618738 1197 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AL356596.1-201ENST00000624230 379 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 AL391099.1-201ENST00000624635 187 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 U2.21-201ENST00000637295 81 ntBASIC-0.45□□□□□ -2.48
VPS13DQ5THJ4 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 PCNPP3-201ENST00000393579 471 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 RAP1BP3-201ENST00000407180 549 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AC027644.1-201ENST00000419595 298 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 RNU1-117P-201ENST00000517041 158 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AC023824.3-201ENST00000569003 562 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AC100830.2-201ENST00000581636 240 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AF038458.1-201ENST00000588406 262 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AC025588.3-201ENST00000604182 274 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 RBM11P1-201ENST00000604951 799 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AL355816.2-201ENST00000610049 647 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 uc_338.28-201ENST00000612082 187 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AC018926.1-201ENST00000616335 435 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AC080188.3-201ENST00000624842 748 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 SCARNA4-202ENST00000625402 129 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 SNORA51.10-201ENST00000384418 136 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 MIR573-201ENST00000384964 99 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 RNU6-679P-201ENST00000391003 106 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms