Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 RNU6-1115P-201ENST00000362490 106 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 SNORA25B-201ENST00000365507 128 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 SNORA18.2-201ENST00000383865 132 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 UBA52P6-201ENST00000399822 382 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 AL590004.2-201ENST00000404787 371 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 SNORD88.1-201ENST00000408684 91 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 RPS29P6-201ENST00000438196 145 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.58□□□□□ -2
ATPAF1Q5TC12 RNU6-826P-201ENST00000516827 104 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.58□□□□□ -2
ATPAF1Q5TC12 DEFB131C-201ENST00000528817 165 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 AP002404.1-201ENST00000532005 451 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 AC022616.8-201ENST00000533569 253 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.58□□□□□ -2
ATPAF1Q5TC12 AL161756.2-201ENST00000604597 246 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.58□□□□□ -2
ATPAF1Q5TC12 U4atac.1-201ENST00000618345 95 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 MIR8057-201ENST00000620957 69 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.58□□□□□ -2
ATPAF1Q5TC12 MIR3651-201ENST00000630427 90 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.58□□□□□ -2
ATPAF1Q5TC12 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATPAF1Q5TC12 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
ATPAF1Q5TC12 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.57□□□□□ -2
ATPAF1Q5TC12 Y_RNA.11-201ENST00000362375 109 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 SNORD115-8-201ENST00000363856 82 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 Y_RNA.197-201ENST00000364004 102 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 RNU6-743P-201ENST00000364151 106 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 SNORD115-38-201ENST00000365037 82 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 AL138885.1-201ENST00000405921 675 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 SUMO1P4-201ENST00000429430 302 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 WARS2P1-201ENST00000429678 537 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 AC009238.1-201ENST00000442165 424 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 AC009237.6-201ENST00000446969 424 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.57□□□□□ -2
ATPAF1Q5TC12 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.57□□□□□ -2
ATPAF1Q5TC12 RPS27AP9-201ENST00000477681 438 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.57□□□□□ -2
ATPAF1Q5TC12 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.57□□□□□ -2
ATPAF1Q5TC12 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.57□□□□□ -2
ATPAF1Q5TC12 UBL5P4-201ENST00000562584 236 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 CYP2C61P-201ENST00000604072 290 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 AC090971.5-201ENST00000621102 293 ntBASIC2.57□□□□□ -2
ATPAF1Q5TC12 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
ATPAF1Q5TC12 MTND5P16-201ENST00000460269 1703 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ATPAF1Q5TC12 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ATPAF1Q5TC12 Y_RNA.5-201ENST00000362334 102 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 RNY3P11-201ENST00000364153 102 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 Y_RNA.358-201ENST00000365491 99 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 SNORD42.2-201ENST00000365570 69 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 RNU6-159P-201ENST00000391080 106 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 AL078595.1-201ENST00000404458 226 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.56□□□□□ -2
ATPAF1Q5TC12 ARL5AP4-201ENST00000430731 512 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.56□□□□□ -2
ATPAF1Q5TC12 MTCO3P8-201ENST00000453691 755 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.56□□□□□ -2
ATPAF1Q5TC12 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.56□□□□□ -2
ATPAF1Q5TC12 Y_RNA.661-201ENST00000516003 99 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 RNU6-1098P-201ENST00000516772 96 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 RNU2-44P-201ENST00000516795 194 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 RNU6-1198P-201ENST00000516904 67 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 RNA5SP54-201ENST00000516951 92 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 RNU6-667P-201ENST00000517186 102 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.56□□□□□ -2
ATPAF1Q5TC12 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.56□□□□□ -2
ATPAF1Q5TC12 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.56□□□□□ -2
ATPAF1Q5TC12 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.56□□□□□ -2
ATPAF1Q5TC12 AL132822.1-201ENST00000617063 513 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 AC087588.2-201ENST00000617667 426 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 AC005562.2-201ENST00000618264 111 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
ATPAF1Q5TC12 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ATPAF1Q5TC12 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
ATPAF1Q5TC12 BX322639.1-202ENST00000423987 2213 ntBASIC2.56□□□□□ -2
ATPAF1Q5TC12 MIR22-201ENST00000362190 85 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 Y_RNA.314-201ENST00000365114 102 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 SNORA70.4-201ENST00000365509 134 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 Y_RNA.364-201ENST00000365532 101 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 Y_RNA.496-201ENST00000384444 101 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 Y_RNA.557-201ENST00000384680 107 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 MIR625-201ENST00000385047 85 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 Z82209.1-201ENST00000422141 2135 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 USP9YP16-201ENST00000430287 407 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.55□□□□□ -2
ATPAF1Q5TC12 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.55□□□□□ -2
ATPAF1Q5TC12 AC004386.2-201ENST00000441858 148 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.55□□□□□ -2
ATPAF1Q5TC12 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.55□□□□□ -2
ATPAF1Q5TC12 USP9YP23-201ENST00000455085 407 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 U8.22-201ENST00000459141 133 ntBASIC2.55□□□□□ -2
ATPAF1Q5TC12 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
ATPAF1Q5TC12 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms