Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MIR6715A-201ENST00000615929 79 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 MIR8062-201ENST00000621515 85 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC44A4Q53GD3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 RNU4-82P-201ENST00000362443 140 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 Y_RNA.214-201ENST00000364201 112 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 RNA5SP139-201ENST00000364340 117 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 U3.13-201ENST00000364804 214 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 AL139095.1-201ENST00000404326 391 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 Z98742.2-201ENST00000431564 187 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 AC112771.1-201ENST00000463581 102 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 RNA5SP217-201ENST00000515959 91 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 RNU6-397P-201ENST00000516226 104 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 AC004584.2-201ENST00000570407 410 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 AL359198.2-201ENST00000611836 194 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 SNORA43.4-201ENST00000629559 138 ntBASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC44A4Q53GD3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 Y_RNA.64-201ENST00000362845 102 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 RNU6-487P-201ENST00000365430 104 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 SNORA36A-201ENST00000384221 132 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 RNU6-472P-201ENST00000384299 107 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 Y_RNA.504-201ENST00000384481 104 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 RNU6-851P-201ENST00000384565 107 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 MIR625-201ENST00000385047 85 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 MT-TW-201ENST00000387382 68 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 RPL32P35-201ENST00000415214 394 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 AL441985.1-201ENST00000457727 251 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 RPL31P41-201ENST00000477967 372 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 AC107222.1-201ENST00000510899 637 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 RNU7-4P-201ENST00000516961 62 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 HSPE1P4-201ENST00000550617 308 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 MIR5696-201ENST00000578474 85 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 AC005357.1-201ENST00000588399 301 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 RAC1P9-201ENST00000604990 392 ntBASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC44A4Q53GD3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
SLC44A4Q53GD3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
SLC44A4Q53GD3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AC062016.1-201ENST00000355719 319 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 RNU6-874P-201ENST00000362390 105 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 RNU6-212P-201ENST00000362642 104 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.40-201ENST00000362645 93 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 RNU6-529P-201ENST00000363383 104 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 RNU6-708P-201ENST00000384217 107 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 SNORA51.11-201ENST00000384442 131 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 RNA5SP390-201ENST00000410191 113 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 RNA5SP494-201ENST00000410653 129 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 EIF4EP2-201ENST00000422816 654 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AL358075.3-201ENST00000426289 226 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 RPL23AP95-201ENST00000426806 265 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AL109933.2-201ENST00000452651 260 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AC117440.1-201ENST00000474107 571 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 RNY3P15-201ENST00000516297 97 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.680-201ENST00000516441 93 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AC144568.1-201ENST00000520139 137 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 MIR4435-1-201ENST00000582552 80 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AC060766.3-201ENST00000591442 263 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 VN1R91P-201ENST00000594377 169 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AC011373.1-201ENST00000607270 237 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 MIR6733-201ENST00000635723 61 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 AC103988.1-201ENST00000566382 2177 ntBASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC44A4Q53GD3 ZNF299P-201ENST00000406845 1804 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 RNU6-595P-201ENST00000363944 107 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.447-201ENST00000384184 113 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.461-201ENST00000384263 103 ntBASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.07□□□□□ -1.92
SLC44A4Q53GD3 Z98949.2-201ENST00000440996 144 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms